Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227752

Identifier: 21227752

GI number: 21227752

Start: 1970267

End: 1971058

Strand: Direct

Name: 21227752

Synonym: MM_1650

Alternate gene names: NA

Gene position: 1970267-1971058 (Clockwise)

Preceding gene: 21227751

Following gene: 21227753

Centisome position: 48.1

GC content: 43.56

Gene sequence:

>792_bases
ATGAGTATGGAACTGCAGTTAATAGATACCATTTTTTTTTCGGACAAAAGGAAAAATTTGCTTCTGCTCCTGAAGAACGG
GCCAAAAACGATTGAAGAGATAAAGACCGAGCTTGAAGTCAGTTCCAGCCCTATTATGGCTCAGATCCGTATACTTCTTA
AAGATGGGCTGCTGGTGCAGAACGAAGATAGTTACGAACTCTCTGTAAAAGGGAAACTTATAGTCCCCAAAATGGAGCCG
CTTCTCTCTACTTTCCAGGTATTTGATGAGAACCACGATTACTGGGCAAGGCAGAACCTGCGTACTCTTCCTGCTCACCT
GCTGGACAGAATCGGGGAACTGGGCACCTGTAGAGAACTTATACCCGAAAGGACGCATATCTTCGATTACCCTCCGGAAA
TTATGGACCCACTTTACAAGTCCAGAATAGTAATGGAAATATCTTCGTTTTTCCGTCCGGGATATCCAGGCCTTTATCTG
GATCTCGCGCAAAAAGGGATTGAGGTATCTCTTGTCCTTGAAAGGCCAATATACAGGAAGCTGGTCCGTGACTACAGGAA
AGGTGTAGAAGAGTTCCTGAATATGGAGAACACTTCCCTTTTTGTTTGTGACGACAGGATTGATCTTGCTTCCAGCATTA
TTACCGACCGGTTCATTTCTTTATCCATGATCTCAAAAGACGGGAGATATTATAACCACGAGATGGTAAGCTTTGAAAAA
AGCGCTCTTGAATGGGGCAGGGAACTTTTCGACTACTATAAGGACATGTCTGAGCAGGTTATAAAGATTTGA

Upstream 100 bases:

>100_bases
GCGTGTCAACAGCTTTAATACATGTTTGGAGATTTAAATCCCGAATTAATCATCTTATTACATTGATATCAAACTCCTTT
CCGGAGGGAGGCTAAATAGA

Downstream 100 bases:

>100_bases
TCCGGTATTGGATTTTTAAAATCCAATACTTATTCAATAAGAATTCAAAATGGGTTTTACACTAATTTAATAAGGAAGGA
TTCTACACTAATTCACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSMELQLIDTIFFSDKRKNLLLLLKNGPKTIEEIKTELEVSSSPIMAQIRILLKDGLLVQNEDSYELSVKGKLIVPKMEP
LLSTFQVFDENHDYWARQNLRTLPAHLLDRIGELGTCRELIPERTHIFDYPPEIMDPLYKSRIVMEISSFFRPGYPGLYL
DLAQKGIEVSLVLERPIYRKLVRDYRKGVEEFLNMENTSLFVCDDRIDLASSIITDRFISLSMISKDGRYYNHEMVSFEK
SALEWGRELFDYYKDMSEQVIKI

Sequences:

>Translated_263_residues
MSMELQLIDTIFFSDKRKNLLLLLKNGPKTIEEIKTELEVSSSPIMAQIRILLKDGLLVQNEDSYELSVKGKLIVPKMEP
LLSTFQVFDENHDYWARQNLRTLPAHLLDRIGELGTCRELIPERTHIFDYPPEIMDPLYKSRIVMEISSFFRPGYPGLYL
DLAQKGIEVSLVLERPIYRKLVRDYRKGVEEFLNMENTSLFVCDDRIDLASSIITDRFISLSMISKDGRYYNHEMVSFEK
SALEWGRELFDYYKDMSEQVIKI
>Mature_262_residues
SMELQLIDTIFFSDKRKNLLLLLKNGPKTIEEIKTELEVSSSPIMAQIRILLKDGLLVQNEDSYELSVKGKLIVPKMEPL
LSTFQVFDENHDYWARQNLRTLPAHLLDRIGELGTCRELIPERTHIFDYPPEIMDPLYKSRIVMEISSFFRPGYPGLYLD
LAQKGIEVSLVLERPIYRKLVRDYRKGVEEFLNMENTSLFVCDDRIDLASSIITDRFISLSMISKDGRYYNHEMVSFEKS
ALEWGRELFDYYKDMSEQVIKI

Specific function: Unknown

COG id: COG4742

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30806; Mature: 30675

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMELQLIDTIFFSDKRKNLLLLLKNGPKTIEEIKTELEVSSSPIMAQIRILLKDGLLVQ
CCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEE
NEDSYELSVKGKLIVPKMEPLLSTFQVFDENHDYWARQNLRTLPAHLLDRIGELGTCREL
CCCCEEEEECCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
IPERTHIFDYPPEIMDPLYKSRIVMEISSFFRPGYPGLYLDLAQKGIEVSLVLERPIYRK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCHHHHH
LVRDYRKGVEEFLNMENTSLFVCDDRIDLASSIITDRFISLSMISKDGRYYNHEMVSFEK
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHECCCCCEECHHHHHHHH
SALEWGRELFDYYKDMSEQVIKI
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SMELQLIDTIFFSDKRKNLLLLLKNGPKTIEEIKTELEVSSSPIMAQIRILLKDGLLVQ
CCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEE
NEDSYELSVKGKLIVPKMEPLLSTFQVFDENHDYWARQNLRTLPAHLLDRIGELGTCREL
CCCCEEEEECCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
IPERTHIFDYPPEIMDPLYKSRIVMEISSFFRPGYPGLYLDLAQKGIEVSLVLERPIYRK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCHHHHH
LVRDYRKGVEEFLNMENTSLFVCDDRIDLASSIITDRFISLSMISKDGRYYNHEMVSFEK
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHECCCCCEECHHHHHHHH
SALEWGRELFDYYKDMSEQVIKI
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA