| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227734
Identifier: 21227734
GI number: 21227734
Start: 1946470
End: 1947036
Strand: Direct
Name: 21227734
Synonym: MM_1632
Alternate gene names: NA
Gene position: 1946470-1947036 (Clockwise)
Preceding gene: 21227733
Following gene: 21227735
Centisome position: 47.52
GC content: 44.97
Gene sequence:
>567_bases ATGAAAGTTTTAGGATTGATCGGAAGCCCCAGAAAGGATGGAAACACTGAAAAGCTCGTGAATGCTATTCTTGACGGTGC CGCCGAAAAAGGTGCTGAGATAAAAATCTACCATCTTGCCAGAATGGATCTAAAACCCTGTAAAGGCTGCATGTCCTGCA AGCTCGAGGGGAAATGCATTATTGATGACGATATGCAGGAGCTCTATAAAGAAATTCTATCCGCGGATGCCATTGTACTC GGTTCTCCTATCTATATGTGGGAAATCACAGCCCTTACAAAAACAATTGTTGACCGCCTGATAGCTTTAACCTGCTGGCA GCCCTGTGCAAAGCCTGAATATCCAAACCTGCTGAGAATAAAGACCAGGCTGGTCCTTGCTTATACATATGGGAACCCGG ACCCCAACAACTTCAACCAGTATTTCAAATATATGGAAGGGCTTTTCAGCTTTTTAGGCTTTGATGTCCAGGGAAGCATC TGGGTTTCGGGCACAATAGGCCCCGATGATATCCTGCACCAGAGTGAAATATTCGAAGAAGCAAGAGCTCTCGGGAAAAA ACTCTAA
Upstream 100 bases:
>100_bases CGGCTGGTAGAAAAAAGATCTTCTGGGGAAACATTTTATACCTCTGTCCTTCCATCTTCTTATTACTCTTTATTTTCCTT TTTCGGAGGAATGCACTCAG
Downstream 100 bases:
>100_bases ATTTATCGGAAAAAAGACATAACCTGCAACTTTTCCCCGAATTCGACTACCGGAGATAGTTCAGGGACAAATTTCAAGTT TTTTCTGAATTTTTCAATCA
Product: iron-sulfur flavoprotein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCIIDDDMQELYKEILSADAIVL GSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRIKTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSI WVSGTIGPDDILHQSEIFEEARALGKKL
Sequences:
>Translated_188_residues MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCIIDDDMQELYKEILSADAIVL GSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRIKTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSI WVSGTIGPDDILHQSEIFEEARALGKKL >Mature_188_residues MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCIIDDDMQELYKEILSADAIVL GSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRIKTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSI WVSGTIGPDDILHQSEIFEEARALGKKL
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 21070; Mature: 21070
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCI CCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHCCHHHCCCCCCEEE IDDDMQELYKEILSADAIVLGSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRI ECHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE KTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSIWVSGTIGPDDILHQSEIFEE EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH ARALGKKL HHHHHCCC >Mature Secondary Structure MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCI CCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHCCHHHCCCCCCEEE IDDDMQELYKEILSADAIVLGSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRI ECHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE KTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSIWVSGTIGPDDILHQSEIFEE EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH ARALGKKL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]