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The map label for this gene is hycF [C]

Identifier: 21227721

GI number: 21227721

Start: 1931221

End: 1931403

Strand: Reverse

Name: hycF [C]

Synonym: MM_1619

Alternate gene names: 21227721

Gene position: 1931403-1931221 (Counterclockwise)

Preceding gene: 21227722

Following gene: 21227720

Centisome position: 47.15

GC content: 46.45

Gene sequence:

>183_bases
ATGCCAGCAATAGTTAACGCAGATGAATGTTCTGGATGCGGAACCTGTGTCGACGAATGTCCCTCTGAAGCAATCACCCT
CGATGAAGAAAAGGGAATTGCAGTTGTTGACCAGGATGAATGTGTAGAGTGCGGTGCATGTGAAGAAGCATGCCCGAACC
AGGCAATTAAAGTAACGGAATAA

Upstream 100 bases:

>100_bases
TGGCGTTATGATCATTTTTTCGATATTCTATGGAAGTTTCAAAAACGCCCCGATATAATTTCCTGGTACATATCGAGCAA
ACAAAAAGGAGTGAAAAAAT

Downstream 100 bases:

>100_bases
AAAAACAGAGATTGAGATGGAATAACTTTTTATTCCATTCTTTTCTTTTTCTCTTTTATCAAATCATTTCTTATCTCTCC
GGAGGTAGCTTTTTAGATGG

Product: ferredoxin

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MPAIVNADECSGCGTCVDECPSEAITLDEEKGIAVVDQDECVECGACEEACPNQAIKVTE

Sequences:

>Translated_60_residues
MPAIVNADECSGCGTCVDECPSEAITLDEEKGIAVVDQDECVECGACEEACPNQAIKVTE
>Mature_59_residues
PAIVNADECSGCGTCVDECPSEAITLDEEKGIAVVDQDECVECGACEEACPNQAIKVTE

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 6237; Mature: 6106

Theoretical pI: Translated: 3.36; Mature: 3.36

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

13.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
15.0 %Cys+Met (Translated Protein)
13.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
13.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIVNADECSGCGTCVDECPSEAITLDEEKGIAVVDQDECVECGACEEACPNQAIKVTE
CCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
PAIVNADECSGCGTCVDECPSEAITLDEEKGIAVVDQDECVECGACEEACPNQAIKVTE
CCCCCCCCCCCCCCCHHHCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6754724 [H]