Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227712

Identifier: 21227712

GI number: 21227712

Start: 1920482

End: 1921669

Strand: Reverse

Name: 21227712

Synonym: MM_1610

Alternate gene names: NA

Gene position: 1921669-1920482 (Counterclockwise)

Preceding gene: 21227713

Following gene: 21227711

Centisome position: 46.91

GC content: 42.34

Gene sequence:

>1188_bases
TTGAGCCTGCCAGAAAAAAAGAACTGTTTGAAACTGAGAGAGTTTACTTTAAGTTTATTTTCTCTAACCCTATTCCTGAT
TTTCTTCTGCACACAGATAAATCCTGTTTACGGAGCTGTAAACGGGGCAGCTATTGAAGAAGAGAATGAAAACAGAATTA
TTATTGGCTTTTTTTCAGACCATGACCTCAGTGATGCAACAGTCAGGTTTGAAGAACCCCATGAAAACGTTTCTCTTGTT
TTTACCCTGAGTTCGGGAAAAGAAACTCTGAAATCAGAAACTTTCCACCTGGTTTCCGTAAAGAAAGACCAGGAGATTTC
AAAAGTCTTTTTCTGGGAGCTTGAAGAAGACTTTGGGAAGGATAGGGACTCTTATACAGCACAGCTTTTTGTAAAAGAAG
GCAATCAAATCCTTGAAACCCAGAAAACCTCATTTTCTTACCGTAACCCTCATCTTTCAAACCTGAAAGTTGTGGATTTT
TCTGCAGATTCCGAAAAAGCTTCATTCCTGATAGATCTTGTAAGTTCCGCAAACCTCAGACTCGTGCAGATGCCTGAGCC
CGGCATTGTAGATTTTGACCTTAAACTCCTTTCCGGCAAGGACATAATATACAGCGAAAGCCTGAAAAATGTCCCTGTAA
CTGATGCTTATTATAAAACAATTAACTGGCCCTTGCTGCTGGAAAAAGACAGGAGCTACACCGCTCTCCTGAAAGTCCAT
TCACATTCCCCCGAGCTTACCACCGCATATATGTCAGAATTCTGGGCGGAAGAAAAGGTAGAAATCCTTGATTCTGACAT
CAACGTGGACGAGTACGGGGCAAGCGTGACTGTAACAGGAAGGTCACAGGTTCCTTTTAATGGAATTGTCAGGGTTGTTC
TAACTCCTGAAGAAGGAGATGTCCGGGTGTTTGAAGAAACTGCGGATATCCTTACTGCGGGAAAAGAAGATACAGTAGGA
ATCATCTGGCAGGGGGTTCCCAGAGGAGACTACAATGTAAAAATAGATGTGGTAAACCTCGACGGTGAAATACTTGACAG
CCATGAAACGGTTTTGCGTGTTTTTGAGCCCGTAGCTGAACTAAATCCTCCTGAAGAGACTCCAGCACTTAGCTCTCAGG
CAGCAACTGGAATTTTACTCTGTGTTGCTGTTTTTCTGGGAAGAAAAAAGAGAGGAAAAAAGGACTGA

Upstream 100 bases:

>100_bases
TTAAACATAGAGGTTCCGACATACATCCATATTGCAGAGATCCTGATTGGGCTGATGGCTCTGCTTCTCTGCAGCTTTTG
GAAAGAAGGAGGACCCGGGC

Downstream 100 bases:

>100_bases
ACCAGGTAACTTTTGAATTATCTGGAGTTAAAACGAATCTGTATGCGGGATCACTATGCTTGACCTGATCATCCGAAACA
TAACGAACCGGAAAATCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSLPEKKNCLKLREFTLSLFSLTLFLIFFCTQINPVYGAVNGAAIEEENENRIIIGFFSDHDLSDATVRFEEPHENVSLV
FTLSSGKETLKSETFHLVSVKKDQEISKVFFWELEEDFGKDRDSYTAQLFVKEGNQILETQKTSFSYRNPHLSNLKVVDF
SADSEKASFLIDLVSSANLRLVQMPEPGIVDFDLKLLSGKDIIYSESLKNVPVTDAYYKTINWPLLLEKDRSYTALLKVH
SHSPELTTAYMSEFWAEEKVEILDSDINVDEYGASVTVTGRSQVPFNGIVRVVLTPEEGDVRVFEETADILTAGKEDTVG
IIWQGVPRGDYNVKIDVVNLDGEILDSHETVLRVFEPVAELNPPEETPALSSQAATGILLCVAVFLGRKKRGKKD

Sequences:

>Translated_395_residues
MSLPEKKNCLKLREFTLSLFSLTLFLIFFCTQINPVYGAVNGAAIEEENENRIIIGFFSDHDLSDATVRFEEPHENVSLV
FTLSSGKETLKSETFHLVSVKKDQEISKVFFWELEEDFGKDRDSYTAQLFVKEGNQILETQKTSFSYRNPHLSNLKVVDF
SADSEKASFLIDLVSSANLRLVQMPEPGIVDFDLKLLSGKDIIYSESLKNVPVTDAYYKTINWPLLLEKDRSYTALLKVH
SHSPELTTAYMSEFWAEEKVEILDSDINVDEYGASVTVTGRSQVPFNGIVRVVLTPEEGDVRVFEETADILTAGKEDTVG
IIWQGVPRGDYNVKIDVVNLDGEILDSHETVLRVFEPVAELNPPEETPALSSQAATGILLCVAVFLGRKKRGKKD
>Mature_394_residues
SLPEKKNCLKLREFTLSLFSLTLFLIFFCTQINPVYGAVNGAAIEEENENRIIIGFFSDHDLSDATVRFEEPHENVSLVF
TLSSGKETLKSETFHLVSVKKDQEISKVFFWELEEDFGKDRDSYTAQLFVKEGNQILETQKTSFSYRNPHLSNLKVVDFS
ADSEKASFLIDLVSSANLRLVQMPEPGIVDFDLKLLSGKDIIYSESLKNVPVTDAYYKTINWPLLLEKDRSYTALLKVHS
HSPELTTAYMSEFWAEEKVEILDSDINVDEYGASVTVTGRSQVPFNGIVRVVLTPEEGDVRVFEETADILTAGKEDTVGI
IWQGVPRGDYNVKIDVVNLDGEILDSHETVLRVFEPVAELNPPEETPALSSQAATGILLCVAVFLGRKKRGKKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44394; Mature: 44262

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPEKKNCLKLREFTLSLFSLTLFLIFFCTQINPVYGAVNGAAIEEENENRIIIGFFSD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEECCCCCCEEEEEEECC
HDLSDATVRFEEPHENVSLVFTLSSGKETLKSETFHLVSVKKDQEISKVFFWELEEDFGK
CCCCCCEEEEECCCCCEEEEEEECCCCHHHHCCCEEEEEECCCCCCCEEEEEEEHHHHCC
DRDSYTAQLFVKEGNQILETQKTSFSYRNPHLSNLKVVDFSADSEKASFLIDLVSSANLR
CCCCEEEEEEEECCCCEEHHHHCCCCCCCCCCCCEEEEEECCCCCHHHEEEEECCCCCEE
LVQMPEPGIVDFDLKLLSGKDIIYSESLKNVPVTDAYYKTINWPLLLEKDRSYTALLKVH
EEECCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHCCCCEEEECCCCEEEEEEEE
SHSPELTTAYMSEFWAEEKVEILDSDINVDEYGASVTVTGRSQVPFNGIVRVVLTPEEGD
CCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHCCCEEEEECCCCCCCCCEEEEEEECCCCC
VRVFEETADILTAGKEDTVGIIWQGVPRGDYNVKIDVVNLDGEILDSHETVLRVFEPVAE
EEEEEHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCEECCHHHHHHHHHHHHH
LNPPEETPALSSQAATGILLCVAVFLGRKKRGKKD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLPEKKNCLKLREFTLSLFSLTLFLIFFCTQINPVYGAVNGAAIEEENENRIIIGFFSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEECCCCCCEEEEEEECC
HDLSDATVRFEEPHENVSLVFTLSSGKETLKSETFHLVSVKKDQEISKVFFWELEEDFGK
CCCCCCEEEEECCCCCEEEEEEECCCCHHHHCCCEEEEEECCCCCCCEEEEEEEHHHHCC
DRDSYTAQLFVKEGNQILETQKTSFSYRNPHLSNLKVVDFSADSEKASFLIDLVSSANLR
CCCCEEEEEEEECCCCEEHHHHCCCCCCCCCCCCEEEEEECCCCCHHHEEEEECCCCCEE
LVQMPEPGIVDFDLKLLSGKDIIYSESLKNVPVTDAYYKTINWPLLLEKDRSYTALLKVH
EEECCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHCCCCEEEECCCCEEEEEEEE
SHSPELTTAYMSEFWAEEKVEILDSDINVDEYGASVTVTGRSQVPFNGIVRVVLTPEEGD
CCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHCCCEEEEECCCCCCCCCEEEEEEECCCCC
VRVFEETADILTAGKEDTVGIIWQGVPRGDYNVKIDVVNLDGEILDSHETVLRVFEPVAE
EEEEEHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCEECCHHHHHHHHHHHHH
LNPPEETPALSSQAATGILLCVAVFLGRKKRGKKD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA