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The map label for this gene is ybjZ [C]

Identifier: 21227711

GI number: 21227711

Start: 1919311

End: 1920426

Strand: Reverse

Name: ybjZ [C]

Synonym: MM_1609

Alternate gene names: 21227711

Gene position: 1920426-1919311 (Counterclockwise)

Preceding gene: 21227712

Following gene: 21227710

Centisome position: 46.88

GC content: 47.49

Gene sequence:

>1116_bases
ATGCTTGACCTGATCATCCGAAACATAACGAACCGGAAAATCCGGAGCGCACTGACTATCTGCGGGATAGCCCTGGGGAT
TTTTGCAGTCATAGTTATGGGTGCCATGTCTGAGAATTTCCATCAGACTTTTGAGCGTTCCATGAGTGTGACCAGTGACA
AAATCCGGGTCTTTGCCGAAAGCGGAGTCTTTGGAGGGGGACTCACGGAAGATAAGGTCAGCGATGTCCTCCGCGTGGCC
GGCGTAGAAGATGCCTACGGGCTTTTAATGACCACTTTTGACGAAGATAAAATGGGCATGACAGGAAAACAGATACTTGG
TGTCCCTCCTGAAAAATCCAGTGTTGCCCTTAACCCTGTGCAACTAAAAGCAGGCCGCTTTCTGGACCCGGGAGATTCTT
ACAGCGTGGTCGTAGGAAACAATATCAAGAGAGAGTACAACCTTGAGATCGGCAGCAAGTTCGAGATCCACGACAAATAT
TTTACCGTTGTTGGGATCCTTGATTATACCGGCTCTATTTTTGACAATGCTGTGATTATTCCTCTTGAAACTGCCCAGGA
CCTTTACAGCGTGGGAAATTCAGTATCCTATATCTTTGCCGTGCCTGATGATAGGGTGGATGCAGAGATGCTCTCCAAAA
GGATCGAGTTAAGTGTAAAAGGCACAAGCACCCTTTCTCCGGGAGAACTTGAGGTGCAGGCAAGACAGTCCTTCATGATT
TTCAGCGTAATAACCATCAGTTCCGGTCTCCTTGCAGCAATCATAGGCGGGCTCTGTGTAATGAATACGATGCTCATGTC
AGTTGCAGAAAGGACAAGAGAGTTTGGAATTTTGAAAGCCATTGGCGCAGAAACTAAAGATATCCTGCTCCTGACACTTG
GAGAAGCCTCCTTGATGGGTCTTTTAGGAGGAATCCTTGGGATTATTGTTGGTATCGGGGCTGTCCAGATTATGAACGCA
TGGCTCGCAACAACCAGGATTGTCCTTTTCCTGATAACCCCGAGGCTCCTTATAATTGCAATGCTTTTTGCTTTACTGAT
AGGTGCTCTTTCAGGGCTTTATCCGGCTTACAGGGCTTCGAAGATGAGCCCTATGGAGGCTTTGAAGCATGCGTGA

Upstream 100 bases:

>100_bases
GTTGCTGTTTTTCTGGGAAGAAAAAAGAGAGGAAAAAAGGACTGAACCAGGTAACTTTTGAATTATCTGGAGTTAAAACG
AATCTGTATGCGGGATCACT

Downstream 100 bases:

>100_bases
AGAAAAAGAGGGAGAAACTGGTGCCGGAAGAAAAGTTATCATGCAGATAGAAAACCTCTCCAAGACCTATATGCAGGGTA
AAATTCCTGTCCATGCCCTC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MLDLIIRNITNRKIRSALTICGIALGIFAVIVMGAMSENFHQTFERSMSVTSDKIRVFAESGVFGGGLTEDKVSDVLRVA
GVEDAYGLLMTTFDEDKMGMTGKQILGVPPEKSSVALNPVQLKAGRFLDPGDSYSVVVGNNIKREYNLEIGSKFEIHDKY
FTVVGILDYTGSIFDNAVIIPLETAQDLYSVGNSVSYIFAVPDDRVDAEMLSKRIELSVKGTSTLSPGELEVQARQSFMI
FSVITISSGLLAAIIGGLCVMNTMLMSVAERTREFGILKAIGAETKDILLLTLGEASLMGLLGGILGIIVGIGAVQIMNA
WLATTRIVLFLITPRLLIIAMLFALLIGALSGLYPAYRASKMSPMEALKHA

Sequences:

>Translated_371_residues
MLDLIIRNITNRKIRSALTICGIALGIFAVIVMGAMSENFHQTFERSMSVTSDKIRVFAESGVFGGGLTEDKVSDVLRVA
GVEDAYGLLMTTFDEDKMGMTGKQILGVPPEKSSVALNPVQLKAGRFLDPGDSYSVVVGNNIKREYNLEIGSKFEIHDKY
FTVVGILDYTGSIFDNAVIIPLETAQDLYSVGNSVSYIFAVPDDRVDAEMLSKRIELSVKGTSTLSPGELEVQARQSFMI
FSVITISSGLLAAIIGGLCVMNTMLMSVAERTREFGILKAIGAETKDILLLTLGEASLMGLLGGILGIIVGIGAVQIMNA
WLATTRIVLFLITPRLLIIAMLFALLIGALSGLYPAYRASKMSPMEALKHA
>Mature_371_residues
MLDLIIRNITNRKIRSALTICGIALGIFAVIVMGAMSENFHQTFERSMSVTSDKIRVFAESGVFGGGLTEDKVSDVLRVA
GVEDAYGLLMTTFDEDKMGMTGKQILGVPPEKSSVALNPVQLKAGRFLDPGDSYSVVVGNNIKREYNLEIGSKFEIHDKY
FTVVGILDYTGSIFDNAVIIPLETAQDLYSVGNSVSYIFAVPDDRVDAEMLSKRIELSVKGTSTLSPGELEVQARQSFMI
FSVITISSGLLAAIIGGLCVMNTMLMSVAERTREFGILKAIGAETKDILLLTLGEASLMGLLGGILGIIVGIGAVQIMNA
WLATTRIVLFLITPRLLIIAMLFALLIGALSGLYPAYRASKMSPMEALKHA

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=125, Percent_Identity=38.4, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 40006; Mature: 40006

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLIIRNITNRKIRSALTICGIALGIFAVIVMGAMSENFHQTFERSMSVTSDKIRVFAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEE
SGVFGGGLTEDKVSDVLRVAGVEDAYGLLMTTFDEDKMGMTGKQILGVPPEKSSVALNPV
CCCCCCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCHHCCCCCCCCCEEECCE
QLKAGRFLDPGDSYSVVVGNNIKREYNLEIGSKFEIHDKYFTVVGILDYTGSIFDNAVII
EECCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCEEEEEEEHHHCCHHHCCEEEE
PLETAQDLYSVGNSVSYIFAVPDDRVDAEMLSKRIELSVKGTSTLSPGELEVQARQSFMI
EECCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCEEHHHHHHHHH
FSVITISSGLLAAIIGGLCVMNTMLMSVAERTREFGILKAIGAETKDILLLTLGEASLMG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHH
LLGGILGIIVGIGAVQIMNAWLATTRIVLFLITPRLLIIAMLFALLIGALSGLYPAYRAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
KMSPMEALKHA
CCCHHHHHHCC
>Mature Secondary Structure
MLDLIIRNITNRKIRSALTICGIALGIFAVIVMGAMSENFHQTFERSMSVTSDKIRVFAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEE
SGVFGGGLTEDKVSDVLRVAGVEDAYGLLMTTFDEDKMGMTGKQILGVPPEKSSVALNPV
CCCCCCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCHHCCCCCCCCCEEECCE
QLKAGRFLDPGDSYSVVVGNNIKREYNLEIGSKFEIHDKYFTVVGILDYTGSIFDNAVII
EECCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCEEEEEEEHHHCCHHHCCEEEE
PLETAQDLYSVGNSVSYIFAVPDDRVDAEMLSKRIELSVKGTSTLSPGELEVQARQSFMI
EECCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCEEHHHHHHHHH
FSVITISSGLLAAIIGGLCVMNTMLMSVAERTREFGILKAIGAETKDILLLTLGEASLMG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHH
LLGGILGIIVGIGAVQIMNAWLATTRIVLFLITPRLLIIAMLFALLIGALSGLYPAYRAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
KMSPMEALKHA
CCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]