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The map label for this gene is ytfH [C]

Identifier: 21227688

GI number: 21227688

Start: 1885649

End: 1886035

Strand: Direct

Name: ytfH [C]

Synonym: MM_1586

Alternate gene names: 21227688

Gene position: 1885649-1886035 (Clockwise)

Preceding gene: 21227677

Following gene: 21227689

Centisome position: 46.03

GC content: 44.96

Gene sequence:

>387_bases
ATGGCAAATGAGGTAAAACAGAATAAACATTATCAATGTCCTGTTGAAGCGACTCTGAATGTAATCGGAGGCAAATGGAA
GCCCATTATTCTCTGGCAGTTGAAAACGGAAAAGCTGAGATTTTCCGGTCTCCAGCAGAATATGCAGGGGATATCTCCCA
AGATGCTTACAAAGCAGCTCCGGGAACTTGAAGACGCGGGGCTTATTTTAAGGAAAGTTTATCCTGAAATCCCTCCCAGA
GTCGAATATTCTCTAACGGAATTCGGGAAAACCGTGCTCCCTGTCCTGGACGCACTCTGCGAGTGGGGAAGTAAATACCT
TGAAAGGGAATGCTCTTCTGGTAAAAGCGGGGAATTAAAAACTGCTGACTTCTCCACTTTACAGTAG

Upstream 100 bases:

>100_bases
AGTAATTTACATTTCTCGATATTTAATTTACAGCAACTATACTTATATACTATACATACAATCCGGATACTCAGTAACAA
AAAGGATACAATGAAAGAGT

Downstream 100 bases:

>100_bases
GCCTGTACATTATCAGTATCAGAAGTCATTTTATATGATTTATCGTTTACAGGACCATTATTTCAGGAAAAATAGATGTC
TGAAAACAGGCCATAATTCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MANEVKQNKHYQCPVEATLNVIGGKWKPIILWQLKTEKLRFSGLQQNMQGISPKMLTKQLRELEDAGLILRKVYPEIPPR
VEYSLTEFGKTVLPVLDALCEWGSKYLERECSSGKSGELKTADFSTLQ

Sequences:

>Translated_128_residues
MANEVKQNKHYQCPVEATLNVIGGKWKPIILWQLKTEKLRFSGLQQNMQGISPKMLTKQLRELEDAGLILRKVYPEIPPR
VEYSLTEFGKTVLPVLDALCEWGSKYLERECSSGKSGELKTADFSTLQ
>Mature_127_residues
ANEVKQNKHYQCPVEATLNVIGGKWKPIILWQLKTEKLRFSGLQQNMQGISPKMLTKQLRELEDAGLILRKVYPEIPPRV
EYSLTEFGKTVLPVLDALCEWGSKYLERECSSGKSGELKTADFSTLQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=91, Percent_Identity=40.6593406593407, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14584; Mature: 14453

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEVKQNKHYQCPVEATLNVIGGKWKPIILWQLKTEKLRFSGLQQNMQGISPKMLTKQL
CCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHH
RELEDAGLILRKVYPEIPPRVEYSLTEFGKTVLPVLDALCEWGSKYLERECSSGKSGELK
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TADFSTLQ
CCCCCCCC
>Mature Secondary Structure 
ANEVKQNKHYQCPVEATLNVIGGKWKPIILWQLKTEKLRFSGLQQNMQGISPKMLTKQL
CCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHH
RELEDAGLILRKVYPEIPPRVEYSLTEFGKTVLPVLDALCEWGSKYLERECSSGKSGELK
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TADFSTLQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]