| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227687
Identifier: 21227687
GI number: 21227687
Start: 1884935
End: 1885492
Strand: Reverse
Name: 21227687
Synonym: MM_1585
Alternate gene names: NA
Gene position: 1885492-1884935 (Counterclockwise)
Preceding gene: 21227690
Following gene: 21227686
Centisome position: 46.03
GC content: 45.7
Gene sequence:
>558_bases ATGAAAGTCATAGGAATTGTTGGAAGCCCCCGAAAGAATGGAAACACAAACATCCTTGTACAGCAGGTTCTGGAAGGCGC AGCAGAGGCAGGTGCCGAGACCCGGAACTTTATCCTCAACGAGATGAACTACAGCGGCTGCCAGGGATGCAATTACTGCA AGAGCCATGATAAGTGTAAGCTTGAAGACGACCTTATGGAATTATTCGACGAACTTGCATCAGCGGACGGGGTTGTTTTT GGCTCCCCCATCTACTTTGGTCAGTTTACAGGTCAGATGAGGCTTTTCCTTGACCGTTGCTATTCCCTCATAAATGCTGA TTTCTCTCCCCGCCTCCCTGCCGGAAAAAAAGCTGTGGTCATAGGAACTCAGGGAGCACCTGATGCGGAAGCTTTCAAAG GAGTTTATGAGGAATTCAAAGGACAGATTTCGAACTTTATGCGCATGGATGTAAAGGATACGATAGTAGGAATCGGATAC CATGCACCCGGAGAAGTAAAAGAAGACACAGAACTTATGGAAAAAGCAAAAAATACAGGCATTAACCTCTTTAAATAA
Upstream 100 bases:
>100_bases AAGTATAGTTGCTGTAAATTAAATATCGAGAAATGTAAATTACTGACAGAAAGATCTCTATTTTGTAAAAAAGCTCGAAT AAAAGATAAAAGGTGTAAGA
Downstream 100 bases:
>100_bases AATAAAACAACCGGAAAAGAAAACAAAAAACAAGATAAGATAGGGAAACCGGGAAAGAGAATAAAAACGGGATAATAAGA CGGGGCGAGAGAAAACTGGA
Product: iron-sulfur flavoprotein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCKLEDDLMELFDELASADGVVF GSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVVIGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGY HAPGEVKEDTELMEKAKNTGINLFK
Sequences:
>Translated_185_residues MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCKLEDDLMELFDELASADGVVF GSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVVIGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGY HAPGEVKEDTELMEKAKNTGINLFK >Mature_185_residues MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCKLEDDLMELFDELASADGVVF GSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVVIGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGY HAPGEVKEDTELMEKAKNTGINLFK
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20310; Mature: 20310
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCK CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCC LEDDLMELFDELASADGVVFGSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVV CHHHHHHHHHHHHCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE IGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGYHAPGEVKEDTELMEKAKNTG EECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCC INLFK CCCCC >Mature Secondary Structure MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCK CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCC LEDDLMELFDELASADGVVFGSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVV CHHHHHHHHHHHHCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE IGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGYHAPGEVKEDTELMEKAKNTG EECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCC INLFK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]