Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227687

Identifier: 21227687

GI number: 21227687

Start: 1884935

End: 1885492

Strand: Reverse

Name: 21227687

Synonym: MM_1585

Alternate gene names: NA

Gene position: 1885492-1884935 (Counterclockwise)

Preceding gene: 21227690

Following gene: 21227686

Centisome position: 46.03

GC content: 45.7

Gene sequence:

>558_bases
ATGAAAGTCATAGGAATTGTTGGAAGCCCCCGAAAGAATGGAAACACAAACATCCTTGTACAGCAGGTTCTGGAAGGCGC
AGCAGAGGCAGGTGCCGAGACCCGGAACTTTATCCTCAACGAGATGAACTACAGCGGCTGCCAGGGATGCAATTACTGCA
AGAGCCATGATAAGTGTAAGCTTGAAGACGACCTTATGGAATTATTCGACGAACTTGCATCAGCGGACGGGGTTGTTTTT
GGCTCCCCCATCTACTTTGGTCAGTTTACAGGTCAGATGAGGCTTTTCCTTGACCGTTGCTATTCCCTCATAAATGCTGA
TTTCTCTCCCCGCCTCCCTGCCGGAAAAAAAGCTGTGGTCATAGGAACTCAGGGAGCACCTGATGCGGAAGCTTTCAAAG
GAGTTTATGAGGAATTCAAAGGACAGATTTCGAACTTTATGCGCATGGATGTAAAGGATACGATAGTAGGAATCGGATAC
CATGCACCCGGAGAAGTAAAAGAAGACACAGAACTTATGGAAAAAGCAAAAAATACAGGCATTAACCTCTTTAAATAA

Upstream 100 bases:

>100_bases
AAGTATAGTTGCTGTAAATTAAATATCGAGAAATGTAAATTACTGACAGAAAGATCTCTATTTTGTAAAAAAGCTCGAAT
AAAAGATAAAAGGTGTAAGA

Downstream 100 bases:

>100_bases
AATAAAACAACCGGAAAAGAAAACAAAAAACAAGATAAGATAGGGAAACCGGGAAAGAGAATAAAAACGGGATAATAAGA
CGGGGCGAGAGAAAACTGGA

Product: iron-sulfur flavoprotein

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCKLEDDLMELFDELASADGVVF
GSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVVIGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGY
HAPGEVKEDTELMEKAKNTGINLFK

Sequences:

>Translated_185_residues
MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCKLEDDLMELFDELASADGVVF
GSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVVIGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGY
HAPGEVKEDTELMEKAKNTGINLFK
>Mature_185_residues
MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCKLEDDLMELFDELASADGVVF
GSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVVIGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGY
HAPGEVKEDTELMEKAKNTGINLFK

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 20310; Mature: 20310

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCK
CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCC
LEDDLMELFDELASADGVVFGSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVV
CHHHHHHHHHHHHCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
IGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGYHAPGEVKEDTELMEKAKNTG
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCC
INLFK
CCCCC
>Mature Secondary Structure
MKVIGIVGSPRKNGNTNILVQQVLEGAAEAGAETRNFILNEMNYSGCQGCNYCKSHDKCK
CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCC
LEDDLMELFDELASADGVVFGSPIYFGQFTGQMRLFLDRCYSLINADFSPRLPAGKKAVV
CHHHHHHHHHHHHCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
IGTQGAPDAEAFKGVYEEFKGQISNFMRMDVKDTIVGIGYHAPGEVKEDTELMEKAKNTG
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCC
INLFK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]