| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227676
Identifier: 21227676
GI number: 21227676
Start: 1875269
End: 1876045
Strand: Reverse
Name: 21227676
Synonym: MM_1574
Alternate gene names: NA
Gene position: 1876045-1875269 (Counterclockwise)
Preceding gene: 21227678
Following gene: 21227674
Centisome position: 45.8
GC content: 36.42
Gene sequence:
>777_bases GTGTCTGGGATTTATGAAAAAAACAGATCAGGAGGATACGAACAAAACATTTCAGAGGGGTATGAAAAAAATGTGTTAAG ACCAAAAAATGTATGGGAAGAGTTTTTTGCAGATAAAAGAAGTGGGGGTCACAGGTCTTCAGCTGAAGAATTTCTTTCTA TGGAAGCGAGAGAAAAATTATTCCATCTCAATGGCGGAAAAACTATTCTTGACTTTGGGTGCGGAGCTGGAGAACTCCTG GTCTACTACGCACCGGAATATGAAAAAACAATAGGAGTTGATTTTTCTCCGTCCATGCTTGAGGAAGCAGGCAAAAGAAT AAGGGAAAGAAATTGTAAAAATACAATTTTAATTCTGGCGGACGACAAAACCGTATGGGACAGGCTGGACTCTCCCCTTG ATCGAATAACTGCAGCCGGAGTGTTTCAATATCTCACATATCAGGAAATTGATGATTTTATTTTTAATGCATCAACATAT CTTAATAAAGATGGGAAAATAGTATTGTTTGACATGCTGGACCCCCGATTATACCCTCTGTGGAAAATAGGGCTTTTTTC ACAGGATAATAGCTGTAAGAAAATAATAAGCAAAGCAATTTGCGGGGTTAGAAATACAATATCATCAAGCTTAAAAAGGC GCCCGAGAGACATTTTGGGGTATTCACATTATCCCGGTAAAATTAAAAAAATTGCAAATAAAAATGGTTTTGAAATGATT TGTGTACAATCAATGTACTATGAATACAAATATCATGCAATAATATTCAGGAGTTAA
Upstream 100 bases:
>100_bases GCTATAGCAAACTGGCTGATTTTAGAGTTCATAATAAGGGGTATAGAAAAAGCAATACTTGGGGGGTATGAAAGGAATGG CTGTGGGGCATGAAAAAAAA
Downstream 100 bases:
>100_bases ACAGCCTTTAAAGTGGAGACTGAATCAAGCCTGTTTTTAGCAGATGAACATAAAAACTCATTTTATTTTTTCTTGATGGA TAAGACACAATTTCATAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSGIYEKNRSGGYEQNISEGYEKNVLRPKNVWEEFFADKRSGGHRSSAEEFLSMEAREKLFHLNGGKTILDFGCGAGELL VYYAPEYEKTIGVDFSPSMLEEAGKRIRERNCKNTILILADDKTVWDRLDSPLDRITAAGVFQYLTYQEIDDFIFNASTY LNKDGKIVLFDMLDPRLYPLWKIGLFSQDNSCKKIISKAICGVRNTISSSLKRRPRDILGYSHYPGKIKKIANKNGFEMI CVQSMYYEYKYHAIIFRS
Sequences:
>Translated_258_residues MSGIYEKNRSGGYEQNISEGYEKNVLRPKNVWEEFFADKRSGGHRSSAEEFLSMEAREKLFHLNGGKTILDFGCGAGELL VYYAPEYEKTIGVDFSPSMLEEAGKRIRERNCKNTILILADDKTVWDRLDSPLDRITAAGVFQYLTYQEIDDFIFNASTY LNKDGKIVLFDMLDPRLYPLWKIGLFSQDNSCKKIISKAICGVRNTISSSLKRRPRDILGYSHYPGKIKKIANKNGFEMI CVQSMYYEYKYHAIIFRS >Mature_257_residues SGIYEKNRSGGYEQNISEGYEKNVLRPKNVWEEFFADKRSGGHRSSAEEFLSMEAREKLFHLNGGKTILDFGCGAGELLV YYAPEYEKTIGVDFSPSMLEEAGKRIRERNCKNTILILADDKTVWDRLDSPLDRITAAGVFQYLTYQEIDDFIFNASTYL NKDGKIVLFDMLDPRLYPLWKIGLFSQDNSCKKIISKAICGVRNTISSSLKRRPRDILGYSHYPGKIKKIANKNGFEMIC VQSMYYEYKYHAIIFRS
Specific function: Unknown
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29725; Mature: 29594
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIYEKNRSGGYEQNISEGYEKNVLRPKNVWEEFFADKRSGGHRSSAEEFLSMEAREKL CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FHLNGGKTILDFGCGAGELLVYYAPEYEKTIGVDFSPSMLEEAGKRIRERNCKNTILILA EECCCCCEEEEECCCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEE DDKTVWDRLDSPLDRITAAGVFQYLTYQEIDDFIFNASTYLNKDGKIVLFDMLDPRLYPL CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCE WKIGLFSQDNSCKKIISKAICGVRNTISSSLKRRPRDILGYSHYPGKIKKIANKNGFEMI EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCCCEEE CVQSMYYEYKYHAIIFRS EHHHHHHHEEEEEEEEEC >Mature Secondary Structure SGIYEKNRSGGYEQNISEGYEKNVLRPKNVWEEFFADKRSGGHRSSAEEFLSMEAREKL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FHLNGGKTILDFGCGAGELLVYYAPEYEKTIGVDFSPSMLEEAGKRIRERNCKNTILILA EECCCCCEEEEECCCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEE DDKTVWDRLDSPLDRITAAGVFQYLTYQEIDDFIFNASTYLNKDGKIVLFDMLDPRLYPL CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCE WKIGLFSQDNSCKKIISKAICGVRNTISSSLKRRPRDILGYSHYPGKIKKIANKNGFEMI EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCCCEEE CVQSMYYEYKYHAIIFRS EHHHHHHHEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA