| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227674
Identifier: 21227674
GI number: 21227674
Start: 1872472
End: 1873479
Strand: Reverse
Name: 21227674
Synonym: MM_1572
Alternate gene names: NA
Gene position: 1873479-1872472 (Counterclockwise)
Preceding gene: 21227676
Following gene: 21227672
Centisome position: 45.74
GC content: 42.96
Gene sequence:
>1008_bases ATGGACGGAATTGAAGTTAGAGAATTACTGCCATCCGAATACAAAGAATGGGATTTGCTTGTAGAAAAAGCTCAACCCGG TACACTCTTTCATACAAGTGAATGGCTTGAAATTTGCAGGGATATCCTATCAAAAGACCTTAGAATCTACGGCTGTTTCA GAAACGGCGAACTTGTGGGAGGCTGCCCTCTTTTTGTAAAAAATATAAAAGGAGTGTTGAAAGTAGCAAGTTCAACCTGT AAAATGACCAGCTACAGCGGTCCCCTTCTAAAAGAAAGTGCCAGCTCCAGAGCAAATAAACGGATACAGGAAACCCATGA AATCCTCAATCCTCTCAGGGAATTTTTCTGCAAGCAGGGATTTGACAGCATTCACCTTACATTCGCTCCGGGCTTTGAGG ATATAAGACCGTTTACGTGGAACGGATGGGATTCTGCCGTACATTACACCCATTACCTGAGTCTGAAAGAAAACATAGAC GAAAACCTTTCAGGGGAAAGGCAGATAGAACTTAAAACTGCAACCGGGGCAGGACTTAAAACCCGGGTATCCAATGACCC TGAAACATATTATCGCCTGCTTTCACTGGCTTATGAAAAGAAGAATTTAGAGCCTCCTTTGCCTGGAGGGTTCTATGATA GAGTATTTAAGCTGATTCAGAAAAAAAGCGCCGGATACATGTTTGTCTCCGAGACTCCTGAGGGCGAAGCTGTTGCAGCT CACATAAACCTGTACGGAAAAAAATGCGCTGTAATCTGGACCTCAGCCCTGAACCCTGATTTTGATCGTTTGGGCCCCAA TGCTCTTCTGTATTATAATGAATTTCTTGACCTGAGATCCCGGAACTTCGAATACATGAACGTAATGGCAGCAAATATTC CTGTATTTGTGGATTTTATTATGGGCTTTTCTCCTGAGCTGATTCCGTATTATAGTGTGACCCTGGAGAGCAAAAAATAC TCAGCCGCGAAAACCTTATACAGAACCACTCATAAGGAAACCTATTGA
Upstream 100 bases:
>100_bases TTGGAACTGAGTCATGGATAACATTCATTTCACTAACAGATTTTGGAACCGAGTAGTTCATCATACATAAGAATAATTAT CTATTTTTACGGGGCTTAAA
Downstream 100 bases:
>100_bases TAGAAAACTGCATTCCCCTGGATAGAAAAATAGGGAACAAAAAAGAAACATAAAATTCTTCGAAGAACAGGCACAAAAAA CGCACATGAATTTCTTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MDGIEVRELLPSEYKEWDLLVEKAQPGTLFHTSEWLEICRDILSKDLRIYGCFRNGELVGGCPLFVKNIKGVLKVASSTC KMTSYSGPLLKESASSRANKRIQETHEILNPLREFFCKQGFDSIHLTFAPGFEDIRPFTWNGWDSAVHYTHYLSLKENID ENLSGERQIELKTATGAGLKTRVSNDPETYYRLLSLAYEKKNLEPPLPGGFYDRVFKLIQKKSAGYMFVSETPEGEAVAA HINLYGKKCAVIWTSALNPDFDRLGPNALLYYNEFLDLRSRNFEYMNVMAANIPVFVDFIMGFSPELIPYYSVTLESKKY SAAKTLYRTTHKETY
Sequences:
>Translated_335_residues MDGIEVRELLPSEYKEWDLLVEKAQPGTLFHTSEWLEICRDILSKDLRIYGCFRNGELVGGCPLFVKNIKGVLKVASSTC KMTSYSGPLLKESASSRANKRIQETHEILNPLREFFCKQGFDSIHLTFAPGFEDIRPFTWNGWDSAVHYTHYLSLKENID ENLSGERQIELKTATGAGLKTRVSNDPETYYRLLSLAYEKKNLEPPLPGGFYDRVFKLIQKKSAGYMFVSETPEGEAVAA HINLYGKKCAVIWTSALNPDFDRLGPNALLYYNEFLDLRSRNFEYMNVMAANIPVFVDFIMGFSPELIPYYSVTLESKKY SAAKTLYRTTHKETY >Mature_335_residues MDGIEVRELLPSEYKEWDLLVEKAQPGTLFHTSEWLEICRDILSKDLRIYGCFRNGELVGGCPLFVKNIKGVLKVASSTC KMTSYSGPLLKESASSRANKRIQETHEILNPLREFFCKQGFDSIHLTFAPGFEDIRPFTWNGWDSAVHYTHYLSLKENID ENLSGERQIELKTATGAGLKTRVSNDPETYYRLLSLAYEKKNLEPPLPGGFYDRVFKLIQKKSAGYMFVSETPEGEAVAA HINLYGKKCAVIWTSALNPDFDRLGPNALLYYNEFLDLRSRNFEYMNVMAANIPVFVDFIMGFSPELIPYYSVTLESKKY SAAKTLYRTTHKETY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38311; Mature: 38311
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGIEVRELLPSEYKEWDLLVEKAQPGTLFHTSEWLEICRDILSKDLRIYGCFRNGELVG CCCCHHHHHCHHHHHHHHHHEECCCCCCEEECHHHHHHHHHHHHCCCEEEEEECCCCEEC GCPLFVKNIKGVLKVASSTCKMTSYSGPLLKESASSRANKRIQETHEILNPLREFFCKQG CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FDSIHLTFAPGFEDIRPFTWNGWDSAVHYTHYLSLKENIDENLSGERQIELKTATGAGLK CCEEEEEECCCHHHCCCCCCCCCCHHEEHHEEEEHHHHCCCCCCCCEEEEEEECCCCCEE TRVSNDPETYYRLLSLAYEKKNLEPPLPGGFYDRVFKLIQKKSAGYMFVSETPEGEAVAA ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEE HINLYGKKCAVIWTSALNPDFDRLGPNALLYYNEFLDLRSRNFEYMNVMAANIPVFVDFI EEEECCCEEEEEEECCCCCCHHHCCCCEEEEEHHHHHHHCCCCCEEEEEHHCCHHHHHHH MGFSPELIPYYSVTLESKKYSAAKTLYRTTHKETY HCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDGIEVRELLPSEYKEWDLLVEKAQPGTLFHTSEWLEICRDILSKDLRIYGCFRNGELVG CCCCHHHHHCHHHHHHHHHHEECCCCCCEEECHHHHHHHHHHHHCCCEEEEEECCCCEEC GCPLFVKNIKGVLKVASSTCKMTSYSGPLLKESASSRANKRIQETHEILNPLREFFCKQG CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FDSIHLTFAPGFEDIRPFTWNGWDSAVHYTHYLSLKENIDENLSGERQIELKTATGAGLK CCEEEEEECCCHHHCCCCCCCCCCHHEEHHEEEEHHHHCCCCCCCCEEEEEEECCCCCEE TRVSNDPETYYRLLSLAYEKKNLEPPLPGGFYDRVFKLIQKKSAGYMFVSETPEGEAVAA ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEE HINLYGKKCAVIWTSALNPDFDRLGPNALLYYNEFLDLRSRNFEYMNVMAANIPVFVDFI EEEECCCEEEEEEECCCCCCHHHCCCCEEEEEHHHHHHHCCCCCEEEEEHHCCHHHHHHH MGFSPELIPYYSVTLESKKYSAAKTLYRTTHKETY HCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA