Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227672

Identifier: 21227672

GI number: 21227672

Start: 1870179

End: 1870586

Strand: Reverse

Name: 21227672

Synonym: MM_1570

Alternate gene names: NA

Gene position: 1870586-1870179 (Counterclockwise)

Preceding gene: 21227674

Following gene: 21227659

Centisome position: 45.66

GC content: 45.1

Gene sequence:

>408_bases
ATGAAAAAAGCATTAATTATATTGATAGTGTTGTTCGGCGTATTCCTTGCAATAGGATGCGCTGGTGAAGAAGAAAGAGC
TCCAAACGAAACAAGAGCTCCAGAACAGACTGTAACTCCAGCTGAAGCGGTTACTCCAACTGGAGAAGAGGAAACTGAAA
TCCAAACTGTGACGGAGATGAAAGAGTATACACTTGAAGAACTTGCGGAGTACGACGGCAGAAACGGGAAGACATACGTT
GCCTATCAAGGCCAAGTCTATGATGTCTCGAATAGCGATCTATGGGAAAATGGCACCCATAAGGGCACTCACAATGCCGG
GAAGAATCTAACCGAAGAAATGGACGACGCACCACATGGACCTGAAGAACTTAAGGATTACCCTGTAGTTGGGACTCTGA
GAGAATGA

Upstream 100 bases:

>100_bases
ATAAGATAGGTTACAAGAAGAACTATGTTCATCAGCTAGCAGGAATTTAATTATAATTTAAAATATTAATTAGAACGCAA
CTTATATTGGGGGAAAAATA

Downstream 100 bases:

>100_bases
CATGACTCTACAACTTAAGCTTAACAGAACTGATTTTGGATAAACTCAACATATAAATGTTTAGTTAGGACTTACGCACT
TGAGGTTCAAAATCATAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKKALIILIVLFGVFLAIGCAGEEERAPNETRAPEQTVTPAEAVTPTGEEETEIQTVTEMKEYTLEELAEYDGRNGKTYV
AYQGQVYDVSNSDLWENGTHKGTHNAGKNLTEEMDDAPHGPEELKDYPVVGTLRE

Sequences:

>Translated_135_residues
MKKALIILIVLFGVFLAIGCAGEEERAPNETRAPEQTVTPAEAVTPTGEEETEIQTVTEMKEYTLEELAEYDGRNGKTYV
AYQGQVYDVSNSDLWENGTHKGTHNAGKNLTEEMDDAPHGPEELKDYPVVGTLRE
>Mature_135_residues
MKKALIILIVLFGVFLAIGCAGEEERAPNETRAPEQTVTPAEAVTPTGEEETEIQTVTEMKEYTLEELAEYDGRNGKTYV
AYQGQVYDVSNSDLWENGTHKGTHNAGKNLTEEMDDAPHGPEELKDYPVVGTLRE

Specific function: Unknown

COG id: COG4892

COG function: function code R; Predicted heme/steroid binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14932; Mature: 14932

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALIILIVLFGVFLAIGCAGEEERAPNETRAPEQTVTPAEAVTPTGEEETEIQTVTEM
CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH
KEYTLEELAEYDGRNGKTYVAYQGQVYDVSNSDLWENGTHKGTHNAGKNLTEEMDDAPHG
HHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PEELKDYPVVGTLRE
HHHHHCCCCEECCCC
>Mature Secondary Structure
MKKALIILIVLFGVFLAIGCAGEEERAPNETRAPEQTVTPAEAVTPTGEEETEIQTVTEM
CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH
KEYTLEELAEYDGRNGKTYVAYQGQVYDVSNSDLWENGTHKGTHNAGKNLTEEMDDAPHG
HHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PEELKDYPVVGTLRE
HHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA