| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is fmdC [H]
Identifier: 21227669
GI number: 21227669
Start: 1867305
End: 1868171
Strand: Direct
Name: fmdC [H]
Synonym: MM_1567
Alternate gene names: 21227669
Gene position: 1867305-1868171 (Clockwise)
Preceding gene: 21227668
Following gene: 21227670
Centisome position: 45.58
GC content: 49.37
Gene sequence:
>867_bases ATGACAGAGGGAGTACTTGTTCAGAAAAAAACCAATGCCGGTGAAAGTTCCGGAGAAATGGAAGAAGTAACGCTTATTCC TAAAAAAGCGATTGACATTAAACTGGAAGCAGATATTATAACTCCTGATTCCTTTGCAGGCAAGACCACCGAAGAAATAG GGATGCTGTCTGTCTGGCAGGGTCCTAAAACCTATCCTCTTTCCGATTTCTTTGAAGTGATGGGCAGCGCAGGCAGTTCT GCGGCTGAGACTCTGATACGCATAAAAGGCGACGCAATGAGGGTCAAAAGGATCGGAGAAGGCATGAGTGCAGGAAAAAT TGAGATTGAAGGCTCTGCAGGCATGCACGTTGGGACAGGGATGAAAGGAGGAGAGATCACCGTTCACGGAGATGTTGATT CCTGGGCTGGCATGGAAATGCTTGGTGGTCTCCTGCACATTAAAGGCAATGCCGGGGACCATGTGGGCTGTGCTTACAGA GGAAAGTGGCACGGTATGAAAGGTGGACGCATAGTTATTGAAGGCTCGGCAAGGCACCAGCTTGGAGGCGGCATGGATGG CGGAGAAATCCTTGTGGGAGGTAATGTTGAAAGCTTCTGCGGGATCCGCCAGAACGGTGGGCTCATTTTTGTAAAAGGCG GAGCTCTCCGCGGATTGGGTGCTGAAATGGCAGGCGGAACCATAGTTGTAGGGGGCAAAATACAGCGTTTTGCTCCGGGC TTCGAATTTGTTTCTATGGAAAACAAAATAACTTCGGGTGAGCTTGAGCTGATAGGCGAATTCAAAAAATTCACAGGGGA CTATGCGATCAGCAAGAGGGCAAAAGGAGCTCTCTATGTGTCTGCAGACACAAACCCGGAGCTCTGA
Upstream 100 bases:
>100_bases TGGTTCAGGTACTACACTCTTGGTTTTGCCAACTACTCGACTCCAGAGAAATATCTGGCAAACCCGACTCCCATACAGGT TAACAGTGAGAGGTGAAGTG
Downstream 100 bases:
>100_bases GGTGGGAAACATGGAAGTATTACTTATTTCCGGAAGTACAATTGACGAAGGCAGGCTTGCCAAAGGTGGGGACAAGTTCA CGGAAGAGTACACTCTGGAG
Product: molybdenum formylmethanofuran dehydrogenase subunit
Products: NA
Alternate protein names: Molybdenum-containing formylmethanofuran dehydrogenase I subunit C [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTEGVLVQKKTNAGESSGEMEEVTLIPKKAIDIKLEADIITPDSFAGKTTEEIGMLSVWQGPKTYPLSDFFEVMGSAGSS AAETLIRIKGDAMRVKRIGEGMSAGKIEIEGSAGMHVGTGMKGGEITVHGDVDSWAGMEMLGGLLHIKGNAGDHVGCAYR GKWHGMKGGRIVIEGSARHQLGGGMDGGEILVGGNVESFCGIRQNGGLIFVKGGALRGLGAEMAGGTIVVGGKIQRFAPG FEFVSMENKITSGELELIGEFKKFTGDYAISKRAKGALYVSADTNPEL
Sequences:
>Translated_288_residues MTEGVLVQKKTNAGESSGEMEEVTLIPKKAIDIKLEADIITPDSFAGKTTEEIGMLSVWQGPKTYPLSDFFEVMGSAGSS AAETLIRIKGDAMRVKRIGEGMSAGKIEIEGSAGMHVGTGMKGGEITVHGDVDSWAGMEMLGGLLHIKGNAGDHVGCAYR GKWHGMKGGRIVIEGSARHQLGGGMDGGEILVGGNVESFCGIRQNGGLIFVKGGALRGLGAEMAGGTIVVGGKIQRFAPG FEFVSMENKITSGELELIGEFKKFTGDYAISKRAKGALYVSADTNPEL >Mature_287_residues TEGVLVQKKTNAGESSGEMEEVTLIPKKAIDIKLEADIITPDSFAGKTTEEIGMLSVWQGPKTYPLSDFFEVMGSAGSSA AETLIRIKGDAMRVKRIGEGMSAGKIEIEGSAGMHVGTGMKGGEITVHGDVDSWAGMEMLGGLLHIKGNAGDHVGCAYRG KWHGMKGGRIVIEGSARHQLGGGMDGGEILVGGNVESFCGIRQNGGLIFVKGGALRGLGAEMAGGTIVVGGKIQRFAPGF EFVSMENKITSGELELIGEFKKFTGDYAISKRAKGALYVSADTNPEL
Specific function: Catalyzes the reversible oxidation of CO(2) and methanofuran (MFR) to N-formylmethanofuran (CHO-MFR). Can use N- furfurylformamide, formamide, N-methylformamide, and formate as substrates. This enzyme is oxygen-labile [H]
COG id: COG2218
COG function: function code C; Formylmethanofuran dehydrogenase subunit C
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fwdC/fmdC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017550 - InterPro: IPR002489 [H]
Pfam domain/function: PF01493 GXGXG [H]
EC number: =1.2.99.5 [H]
Molecular weight: Translated: 30130; Mature: 29999
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGVLVQKKTNAGESSGEMEEVTLIPKKAIDIKLEADIITPDSFAGKTTEEIGMLSVWQ CCCCEEEEECCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCHHHCCEEEECC GPKTYPLSDFFEVMGSAGSSAAETLIRIKGDAMRVKRIGEGMSAGKIEIEGSAGMHVGTG CCCCCCHHHHHHHHCCCCCHHHEEEEEECCCCEEEHHHCCCCCCCEEEECCCCCEEECCC MKGGEITVHGDVDSWAGMEMLGGLLHIKGNAGDHVGCAYRGKWHGMKGGRIVIEGSARHQ CCCCEEEEEECCCCCCCHHHHCCEEEEECCCCCCCEEEEECEECCCCCCEEEEECCCCCC LGGGMDGGEILVGGNVESFCGIRQNGGLIFVKGGALRGLGAEMAGGTIVVGGKIQRFAPG CCCCCCCCEEEECCCHHHHCCEECCCCEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCC FEFVSMENKITSGELELIGEFKKFTGDYAISKRAKGALYVSADTNPEL EEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure TEGVLVQKKTNAGESSGEMEEVTLIPKKAIDIKLEADIITPDSFAGKTTEEIGMLSVWQ CCCEEEEECCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCHHHCCEEEECC GPKTYPLSDFFEVMGSAGSSAAETLIRIKGDAMRVKRIGEGMSAGKIEIEGSAGMHVGTG CCCCCCHHHHHHHHCCCCCHHHEEEEEECCCCEEEHHHCCCCCCCEEEECCCCCEEECCC MKGGEITVHGDVDSWAGMEMLGGLLHIKGNAGDHVGCAYRGKWHGMKGGRIVIEGSARHQ CCCCEEEEEECCCCCCCHHHHCCEEEEECCCCCCCEEEEECEECCCCCCEEEEECCCCCC LGGGMDGGEILVGGNVESFCGIRQNGGLIFVKGGALRGLGAEMAGGTIVVGGKIQRFAPG CCCCCCCCEEEECCCHHHHCCEECCCCEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCC FEFVSMENKITSGELELIGEFKKFTGDYAISKRAKGALYVSADTNPEL EEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8617280; 8125106 [H]