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The map label for this gene is 21227656

Identifier: 21227656

GI number: 21227656

Start: 1855125

End: 1855904

Strand: Direct

Name: 21227656

Synonym: MM_1554

Alternate gene names: NA

Gene position: 1855125-1855904 (Clockwise)

Preceding gene: 21227652

Following gene: 21227657

Centisome position: 45.29

GC content: 42.05

Gene sequence:

>780_bases
ATGTTTTTACAGCACAATAATCAATTAATTTGCAATCTGGAGAAGATGGGGCTAACTGAAAACGAGGCAAAAGCCTATGT
AGGGCTTGTCAGTCTTGGAGAGGCTACGGCACGAGAAGTTCATGAACTTACAAACGTGCCGAGAGCCAAGATATATGAAG
TCCTTAAAGTACTCGCAAAAAGGGGTTATCTGGAAGTCCGACAGGGCTCTCCGACTTACTTCCGTGCAGTTGATCCCAAG
CAGGTAATAGGCAAGATAAAAGACGAATTCATTAACTGCGCAATCGAAACTCTTGACCAGCTCAATGAACTCAGTTATGA
GCTTCCCAGGACATCTCCTGTCTGGTGCATCCAGAGCGAATGGGGGATTAAAAACAGGATCCGTGAAATTCTCAATGGGG
TAAAAGAAGAGCTGATTGTCTTCTCATCCAGCCCCAGGTTCTTTCAGGAATTTGAAGCTGAACTGAAAAAACTGGAAAAA
ACCTGCCAGTTAACCTTTATTATAAGTGAACCTGAAAAGTTTGAATCGTTTCCATTTGAGTTCCGGGAAACCACTAAAGA
ATTTCGCGAGTTCCTGAACAATATCGTAATTGATGGAATCAGGTATGACGAAGAATTTTTTATGATAGCTGACGGAAAGG
AATCAATAGGGGTGCACAGCGCAGGAGACAAAAGAGAAGCGGTTGTAATCAAACTGCCAGTTGTTTGTTACCTGCAAAAG
ATGATTTATGATAGGGTTCTCGAGCCAAGCTTCGTTAAAAAAAATCGTAAATCTGCTTGA

Upstream 100 bases:

>100_bases
CTTCTCTTTTCCGACTGTATGAATAGTTCTTTAATGTCTAGGCTCTGTGAGTATTATATTTAGAAAAGATTTAAATCTAT
TGTTACTTTAGGGGTAACAG

Downstream 100 bases:

>100_bases
TAAACTTTTTCAGGCCTGTATTTATAAAGTCCCAATCTTCGGGTAATATTAATATGATTTAATAATAAAGTTCCCTTACA
GGTTTATATTTATAAATCCA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; TrmB Family Transcriptional Regulator; Sugar-Specific Transcriptional Regulator; Transcription Regulator Helix-Turn-Helix Family; Sugar-Specific Transcriptional Regulator TrmB Family; RNA Polymerase Rbp

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MFLQHNNQLICNLEKMGLTENEAKAYVGLVSLGEATAREVHELTNVPRAKIYEVLKVLAKRGYLEVRQGSPTYFRAVDPK
QVIGKIKDEFINCAIETLDQLNELSYELPRTSPVWCIQSEWGIKNRIREILNGVKEELIVFSSSPRFFQEFEAELKKLEK
TCQLTFIISEPEKFESFPFEFRETTKEFREFLNNIVIDGIRYDEEFFMIADGKESIGVHSAGDKREAVVIKLPVVCYLQK
MIYDRVLEPSFVKKNRKSA

Sequences:

>Translated_259_residues
MFLQHNNQLICNLEKMGLTENEAKAYVGLVSLGEATAREVHELTNVPRAKIYEVLKVLAKRGYLEVRQGSPTYFRAVDPK
QVIGKIKDEFINCAIETLDQLNELSYELPRTSPVWCIQSEWGIKNRIREILNGVKEELIVFSSSPRFFQEFEAELKKLEK
TCQLTFIISEPEKFESFPFEFRETTKEFREFLNNIVIDGIRYDEEFFMIADGKESIGVHSAGDKREAVVIKLPVVCYLQK
MIYDRVLEPSFVKKNRKSA
>Mature_259_residues
MFLQHNNQLICNLEKMGLTENEAKAYVGLVSLGEATAREVHELTNVPRAKIYEVLKVLAKRGYLEVRQGSPTYFRAVDPK
QVIGKIKDEFINCAIETLDQLNELSYELPRTSPVWCIQSEWGIKNRIREILNGVKEELIVFSSSPRFFQEFEAELKKLEK
TCQLTFIISEPEKFESFPFEFRETTKEFREFLNNIVIDGIRYDEEFFMIADGKESIGVHSAGDKREAVVIKLPVVCYLQK
MIYDRVLEPSFVKKNRKSA

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30046; Mature: 30046

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLQHNNQLICNLEKMGLTENEAKAYVGLVSLGEATAREVHELTNVPRAKIYEVLKVLAK
CCEECCCCEEEEHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RGYLEVRQGSPTYFRAVDPKQVIGKIKDEFINCAIETLDQLNELSYELPRTSPVWCIQSE
CCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
WGIKNRIREILNGVKEELIVFSSSPRFFQEFEAELKKLEKTCQLTFIISEPEKFESFPFE
CCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHCCCHH
FRETTKEFREFLNNIVIDGIRYDEEFFMIADGKESIGVHSAGDKREAVVIKLPVVCYLQK
HHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHH
MIYDRVLEPSFVKKNRKSA
HHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MFLQHNNQLICNLEKMGLTENEAKAYVGLVSLGEATAREVHELTNVPRAKIYEVLKVLAK
CCEECCCCEEEEHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RGYLEVRQGSPTYFRAVDPKQVIGKIKDEFINCAIETLDQLNELSYELPRTSPVWCIQSE
CCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
WGIKNRIREILNGVKEELIVFSSSPRFFQEFEAELKKLEKTCQLTFIISEPEKFESFPFE
CCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHCCCHH
FRETTKEFREFLNNIVIDGIRYDEEFFMIADGKESIGVHSAGDKREAVVIKLPVVCYLQK
HHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHH
MIYDRVLEPSFVKKNRKSA
HHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA