Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227657

Identifier: 21227657

GI number: 21227657

Start: 1856032

End: 1856691

Strand: Direct

Name: 21227657

Synonym: MM_1555

Alternate gene names: NA

Gene position: 1856032-1856691 (Clockwise)

Preceding gene: 21227656

Following gene: 21227658

Centisome position: 45.31

GC content: 43.64

Gene sequence:

>660_bases
GTGAATAGTGTGAAAATCAAGGATATCAGCATTCAATGGTTAGGGCATGCCGGTTTTTTGCTTGAAGGGGAAGGCAAAAA
AATCTATATTGATCCTTTTAGGATTGCTCAGGAGCCTGCTTTTGATGACAGGGCAGATATTCTCCTTATCACTCATGAAC
ACTATGATCACTGCAGCCCTGATGATATCAGGAAGGTCAGGAAATCTGACACTACTACCCTTATCCCTGAAAATTGTTCT
CTTGAATTCAAGGGAGATGCAAGGAGGGTTGCTGAAGGGGATATTCTGGCTGATGGGCTTGAGATCAAAGGGACCCGGAT
TGAAGTGGTCCCTGCTTATAATATTGATAAGCCGTATCATCCCAGAGGGCTTGGAGTGGGGTATATCGTAGAACTTGAAG
GGTTAAGGATTTATCACGCAGGAGATTCAGACTTTATTCCAGAGATAGAGGCTATCAATGCCGATATAGCTCTTCTGCCT
ATCGGGGGTACGTATACCATGAACGAGGAAGAAGCCGCGAATGCAGCAGCAGTTATATCTCCCGGTTTTACTATTCCCAT
GCATTATGGTTCAGAAGGAATTAACGGAGACCCCGAAAGGTTTAAAGCTCTTGTACACAGCAAGAACCCGGATATTAATG
TGATTATTTTTGATTCCTGA

Upstream 100 bases:

>100_bases
AGTCCCAATCTTCGGGTAATATTAATATGATTTAATAATAAAGTTCCCTTACAGGTTTATATTTATAAATCCAGAAAATA
AATCTCGGCAGGTGTATATG

Downstream 100 bases:

>100_bases
TCAGTTTCCTTCGACGGATAGAACAGGACACCCATTTAAGTAAAATTCCAGGATAGATTTACCAATGCCCAGAGCAGCCA
GGAAACAGCAAAAAAACCTT

Product: putative metal dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNSVKIKDISIQWLGHAGFLLEGEGKKIYIDPFRIAQEPAFDDRADILLITHEHYDHCSPDDIRKVRKSDTTTLIPENCS
LEFKGDARRVAEGDILADGLEIKGTRIEVVPAYNIDKPYHPRGLGVGYIVELEGLRIYHAGDSDFIPEIEAINADIALLP
IGGTYTMNEEEAANAAAVISPGFTIPMHYGSEGINGDPERFKALVHSKNPDINVIIFDS

Sequences:

>Translated_219_residues
MNSVKIKDISIQWLGHAGFLLEGEGKKIYIDPFRIAQEPAFDDRADILLITHEHYDHCSPDDIRKVRKSDTTTLIPENCS
LEFKGDARRVAEGDILADGLEIKGTRIEVVPAYNIDKPYHPRGLGVGYIVELEGLRIYHAGDSDFIPEIEAINADIALLP
IGGTYTMNEEEAANAAAVISPGFTIPMHYGSEGINGDPERFKALVHSKNPDINVIIFDS
>Mature_219_residues
MNSVKIKDISIQWLGHAGFLLEGEGKKIYIDPFRIAQEPAFDDRADILLITHEHYDHCSPDDIRKVRKSDTTTLIPENCS
LEFKGDARRVAEGDILADGLEIKGTRIEVVPAYNIDKPYHPRGLGVGYIVELEGLRIYHAGDSDFIPEIEAINADIALLP
IGGTYTMNEEEAANAAAVISPGFTIPMHYGSEGINGDPERFKALVHSKNPDINVIIFDS

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR022877 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 24200; Mature: 24200

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVKIKDISIQWLGHAGFLLEGEGKKIYIDPFRIAQEPAFDDRADILLITHEHYDHCSP
CCCEEEEEEEEEEECCCCEEEECCCCEEEECHHHCCCCCCCCCCCCEEEEEECCCCCCCH
DDIRKVRKSDTTTLIPENCSLEFKGDARRVAEGDILADGLEIKGTRIEVVPAYNIDKPYH
HHHHHHHCCCCEEECCCCCEEEECCCCCEEECCCEEECCEEECCCEEEEEECCCCCCCCC
PRGLGVGYIVELEGLRIYHAGDSDFIPEIEAINADIALLPIGGTYTMNEEEAANAAAVIS
CCCCCEEEEEEEECEEEEECCCCCCCCCEEECCCCEEEEECCCEEEECCHHHCCEEEEEC
PGFTIPMHYGSEGINGDPERFKALVHSKNPDINVIIFDS
CCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MNSVKIKDISIQWLGHAGFLLEGEGKKIYIDPFRIAQEPAFDDRADILLITHEHYDHCSP
CCCEEEEEEEEEEECCCCEEEECCCCEEEECHHHCCCCCCCCCCCCEEEEEECCCCCCCH
DDIRKVRKSDTTTLIPENCSLEFKGDARRVAEGDILADGLEIKGTRIEVVPAYNIDKPYH
HHHHHHHCCCCEEECCCCCEEEECCCCCEEECCCEEECCEEECCCEEEEEECCCCCCCCC
PRGLGVGYIVELEGLRIYHAGDSDFIPEIEAINADIALLPIGGTYTMNEEEAANAAAVIS
CCCCCEEEEEEEECEEEEECCCCCCCCCEEECCCCEEEEECCCEEEECCHHHCCEEEEEC
PGFTIPMHYGSEGINGDPERFKALVHSKNPDINVIIFDS
CCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA