| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227596
Identifier: 21227596
GI number: 21227596
Start: 1781868
End: 1782824
Strand: Direct
Name: 21227596
Synonym: MM_1494
Alternate gene names: NA
Gene position: 1781868-1782824 (Clockwise)
Preceding gene: 21227594
Following gene: 21227597
Centisome position: 43.5
GC content: 46.6
Gene sequence:
>957_bases ATGAACGGGCTTGAAGATCGAGACGGTCTGTCTGAAACCGGTGAATCTCCCAGGGGTCCTGGACTCGAAGAGCAGGATAA CAGGGTTCTTGTTCTCCCTGTAAATGGAGATTCAAGAAAAATTACTCAGATCCTCTCCAACGAAACCTCATTGAAGATAC TTGAACTCCTGGGGAAGAAAAGCATGTCTGCAACGAATATTGCAGAAGAGCTGAAGCTTCCTCTGACAACGGTCAAATAC AACCTTGATTCCCTGGTTGACTCCGACCTTATTAAAGTCAAACAGATTAAGTGGAGCCAGAAAGGCCGCCAGGTTAAGAT CTATGAATCCGTGGAAAAACTGATTGTCCTTGTCCCTTCAAAAAATCCGATAGATAAACTCTCCATAATAAGCCTGCTGC AAAAATACATGGGAGTAATAGGTGCTGCAGTCTTTGCAGCTGCAGGAATAGAATACCTCTCAGCCTATCTGCGGGCAAAA AGTATCATCGATGCCACTGCCCCCCTGCGGATGGGAGTTACGGGTCCGGCAAACAGAACCTCTCCGGAAGCAACAATTAT GGAGAGCTCTGAAGAAGAGAGCTTTAAGCCTGAAGCCGGAAGCCAGGGATCTGCTCTGGACGAGCATTCTATTGCAAAAG ATGAAATCGTAAATGAGATCCCTGAAACAGTTGTAGAAGAACAGGAGGTTGAAGTAGCAGAGGAGGAATATCTGCCTTCG GAAACGGAGTCTACAACACTGGACGCTGATAGCGCTGAAATTCCTGTTCCCGAAGAACTGGAGTCGGGCCAGGGACTTCC CCCTGTTCCTCCCGAAGGGCTTACACATCTCGGAGGGATACACGGGATTTATGATTCACTTTCCCTTCATCCGGGGATCT GGTTCCTTTTCGGGTGCATCTTCGTGATATTTCTGGTAGTTGTAAGAGAAATCTATTATAAGAAAAAAACCAAGTAA
Upstream 100 bases:
>100_bases CGCTCAGAAAATAAAACTTTATATTGAGATCGTTGTAAAGTACAGTATAGAGTACAATTAAAAAATACTGATAAAAAGGT TTTTAAATCAGGAAATAAGC
Downstream 100 bases:
>100_bases TCAGGGATTGTATGAGAGTCGCTTTAAAACTTGCATACATAGGCACCGAGTTTCATGGATCTCAGATTCAGCCTAGTGTT GAAACAGTGGAGAAAGAACT
Product: transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family; Transcription Regulator ArsR Family
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MNGLEDRDGLSETGESPRGPGLEEQDNRVLVLPVNGDSRKITQILSNETSLKILELLGKKSMSATNIAEELKLPLTTVKY NLDSLVDSDLIKVKQIKWSQKGRQVKIYESVEKLIVLVPSKNPIDKLSIISLLQKYMGVIGAAVFAAAGIEYLSAYLRAK SIIDATAPLRMGVTGPANRTSPEATIMESSEEESFKPEAGSQGSALDEHSIAKDEIVNEIPETVVEEQEVEVAEEEYLPS ETESTTLDADSAEIPVPEELESGQGLPPVPPEGLTHLGGIHGIYDSLSLHPGIWFLFGCIFVIFLVVVREIYYKKKTK
Sequences:
>Translated_318_residues MNGLEDRDGLSETGESPRGPGLEEQDNRVLVLPVNGDSRKITQILSNETSLKILELLGKKSMSATNIAEELKLPLTTVKY NLDSLVDSDLIKVKQIKWSQKGRQVKIYESVEKLIVLVPSKNPIDKLSIISLLQKYMGVIGAAVFAAAGIEYLSAYLRAK SIIDATAPLRMGVTGPANRTSPEATIMESSEEESFKPEAGSQGSALDEHSIAKDEIVNEIPETVVEEQEVEVAEEEYLPS ETESTTLDADSAEIPVPEELESGQGLPPVPPEGLTHLGGIHGIYDSLSLHPGIWFLFGCIFVIFLVVVREIYYKKKTK >Mature_318_residues MNGLEDRDGLSETGESPRGPGLEEQDNRVLVLPVNGDSRKITQILSNETSLKILELLGKKSMSATNIAEELKLPLTTVKY NLDSLVDSDLIKVKQIKWSQKGRQVKIYESVEKLIVLVPSKNPIDKLSIISLLQKYMGVIGAAVFAAAGIEYLSAYLRAK SIIDATAPLRMGVTGPANRTSPEATIMESSEEESFKPEAGSQGSALDEHSIAKDEIVNEIPETVVEEQEVEVAEEEYLPS ETESTTLDADSAEIPVPEELESGQGLPPVPPEGLTHLGGIHGIYDSLSLHPGIWFLFGCIFVIFLVVVREIYYKKKTK
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34777; Mature: 34777
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLEDRDGLSETGESPRGPGLEEQDNRVLVLPVNGDSRKITQILSNETSLKILELLGKK CCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCC SMSATNIAEELKLPLTTVKYNLDSLVDSDLIKVKQIKWSQKGRQVKIYESVEKLIVLVPS CCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCC KNPIDKLSIISLLQKYMGVIGAAVFAAAGIEYLSAYLRAKSIIDATAPLRMGVTGPANRT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC SPEATIMESSEEESFKPEAGSQGSALDEHSIAKDEIVNEIPETVVEEQEVEVAEEEYLPS CCCHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ETESTTLDADSAEIPVPEELESGQGLPPVPPEGLTHLGGIHGIYDSLSLHPGIWFLFGCI CCCCCEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH FVIFLVVVREIYYKKKTK HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNGLEDRDGLSETGESPRGPGLEEQDNRVLVLPVNGDSRKITQILSNETSLKILELLGKK CCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCC SMSATNIAEELKLPLTTVKYNLDSLVDSDLIKVKQIKWSQKGRQVKIYESVEKLIVLVPS CCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCC KNPIDKLSIISLLQKYMGVIGAAVFAAAGIEYLSAYLRAKSIIDATAPLRMGVTGPANRT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC SPEATIMESSEEESFKPEAGSQGSALDEHSIAKDEIVNEIPETVVEEQEVEVAEEEYLPS CCCHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ETESTTLDADSAEIPVPEELESGQGLPPVPPEGLTHLGGIHGIYDSLSLHPGIWFLFGCI CCCCCEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH FVIFLVVVREIYYKKKTK HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA