| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227589
Identifier: 21227589
GI number: 21227589
Start: 1772737
End: 1773882
Strand: Reverse
Name: 21227589
Synonym: MM_1487
Alternate gene names: NA
Gene position: 1773882-1772737 (Counterclockwise)
Preceding gene: 21227590
Following gene: 21227586
Centisome position: 43.3
GC content: 46.34
Gene sequence:
>1146_bases ATGGAGTATTACCGCAGAGATCAGATATGGACTGGAGCAATTCTGCGATTTTCTTTTTCAGTTGCCTTTAAATCTCATAA AACTCCTACTAATCCTCTGATCGATGTGGCACGGAAAAAGCAATTTGAAAAGCCCCTGCACGGGGATAAGGAAAGCGTGC GCTTTGCGACCCCTGAGCCTATCGCCCGCTACAGGGCGCAGCGCTTGAAATGCGGAACTCTTGCTGATATCAGCTGCGGG ATAGGAGGGCAAACCGTCTTTTTTGCGCAGCAGTGCGAGTTTGTATATGCAGTGGAAATCGACCCTAAAAAAATAGAATA TGCGAAAAAGAACTGTGAGATGTACGGGCTTGACAATGTGAAATTCATCTGTGGGGATGCGCTTGATCCGAAGGTTATCG AGCAAATACCGGCAGTAGATGTTGTTTTTTCAGATCCCTTCCGCCCTGCCGAAGAAGATAAAAGGCAGGTCTCAAGCCTT GAACCCGGGATCCCGAATGTGCTTTCAGCCTATGGGGAAAAGACAAAGAATTTTGCCTTTGAAGCCCCTCCCCAGATGCC CCCGGAAAGGATTCCTTTTGACTGCGAGAAAGAGTATATTTCCCTGGATGGCCAGCTCAACCGTTTGACTCTTTATTTCG GTGATTTAAAACAGAATGAACGGCTGGCTGTAGCCCTGCCTGCGGGAGAAGGGCTGGTTTCACAATACGGACCGCTTCCA GAGATAAGGGAAACGGAAAAAATGAAACTCTTTGCCTATGAACCCGAACCTTCTGTTATTGCAGCAGAGCTTCTTCCTGA ACTTATTGAATCCATGATGCAGATGGCAGGGCCTCTAATGGGAGCCTTCGAACTATTCAGGGTTGACAAAAAGAGGCTGT TAATAACCTCGGAAGCCCTTATAAAGCAGCCCATGATTAAAAACCACTACCTTATCCAGAAAATCTGTCCTTTTGATCCA CGGGAGATTAATAAATTCCTGAAAGACAAAAACATTGGAAATGTCGTCCTTCGGGCGGGCGTAAAGCCTGAGGATTACTG GGAAGTCCGAAACGAAGTGGAAAAAGGGCTTGAAGGAAATAAGACTGTCCACCTTTTTGTAAAAGATGGCGTTGCAATCC TCTGTGAAGTGCTGTTTAAAGTCTGA
Upstream 100 bases:
>100_bases CATTTTACGTTGATATCAGAGATATGATCCCCTGAGAGACTATTTCAGAATTATCCGTTTCAACCCTGTTCAGGGCAGGC AAGTTCGGATTGTTGAGTTT
Downstream 100 bases:
>100_bases AAAAGGAAAAAATAAGAGCCGGGCCTTAAAACCCGGTACCCTTTTTTGAATTCAGGCTCAAAAGATCTTAATTGAGCCTT CTTTAACTGATGTACTCATA
Product: methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MEYYRRDQIWTGAILRFSFSVAFKSHKTPTNPLIDVARKKQFEKPLHGDKESVRFATPEPIARYRAQRLKCGTLADISCG IGGQTVFFAQQCEFVYAVEIDPKKIEYAKKNCEMYGLDNVKFICGDALDPKVIEQIPAVDVVFSDPFRPAEEDKRQVSSL EPGIPNVLSAYGEKTKNFAFEAPPQMPPERIPFDCEKEYISLDGQLNRLTLYFGDLKQNERLAVALPAGEGLVSQYGPLP EIRETEKMKLFAYEPEPSVIAAELLPELIESMMQMAGPLMGAFELFRVDKKRLLITSEALIKQPMIKNHYLIQKICPFDP REINKFLKDKNIGNVVLRAGVKPEDYWEVRNEVEKGLEGNKTVHLFVKDGVAILCEVLFKV
Sequences:
>Translated_381_residues MEYYRRDQIWTGAILRFSFSVAFKSHKTPTNPLIDVARKKQFEKPLHGDKESVRFATPEPIARYRAQRLKCGTLADISCG IGGQTVFFAQQCEFVYAVEIDPKKIEYAKKNCEMYGLDNVKFICGDALDPKVIEQIPAVDVVFSDPFRPAEEDKRQVSSL EPGIPNVLSAYGEKTKNFAFEAPPQMPPERIPFDCEKEYISLDGQLNRLTLYFGDLKQNERLAVALPAGEGLVSQYGPLP EIRETEKMKLFAYEPEPSVIAAELLPELIESMMQMAGPLMGAFELFRVDKKRLLITSEALIKQPMIKNHYLIQKICPFDP REINKFLKDKNIGNVVLRAGVKPEDYWEVRNEVEKGLEGNKTVHLFVKDGVAILCEVLFKV >Mature_381_residues MEYYRRDQIWTGAILRFSFSVAFKSHKTPTNPLIDVARKKQFEKPLHGDKESVRFATPEPIARYRAQRLKCGTLADISCG IGGQTVFFAQQCEFVYAVEIDPKKIEYAKKNCEMYGLDNVKFICGDALDPKVIEQIPAVDVVFSDPFRPAEEDKRQVSSL EPGIPNVLSAYGEKTKNFAFEAPPQMPPERIPFDCEKEYISLDGQLNRLTLYFGDLKQNERLAVALPAGEGLVSQYGPLP EIRETEKMKLFAYEPEPSVIAAELLPELIESMMQMAGPLMGAFELFRVDKKRLLITSEALIKQPMIKNHYLIQKICPFDP REINKFLKDKNIGNVVLRAGVKPEDYWEVRNEVEKGLEGNKTVHLFVKDGVAILCEVLFKV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI151301096, Length=194, Percent_Identity=31.9587628865979, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI221379831, Length=186, Percent_Identity=29.5698924731183, Blast_Score=78, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43320; Mature: 43320
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYYRRDQIWTGAILRFSFSVAFKSHKTPTNPLIDVARKKQFEKPLHGDKESVRFATPEP CCCHHCCCHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCH IARYRAQRLKCGTLADISCGIGGQTVFFAQQCEFVYAVEIDPKKIEYAKKNCEMYGLDNV HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECHHHHHHHHHCCCEECCCCE KFICGDALDPKVIEQIPAVDVVFSDPFRPAEEDKRQVSSLEPGIPNVLSAYGEKTKNFAF EEEECCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHCCCCC EAPPQMPPERIPFDCEKEYISLDGQLNRLTLYFGDLKQNERLAVALPAGEGLVSQYGPLP CCCCCCCCCCCCCCCCHHHEECCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCCC EIRETEKMKLFAYEPEPSVIAAELLPELIESMMQMAGPLMGAFELFRVDKKRLLITSEAL CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHEEEEHHHH IKQPMIKNHYLIQKICPFDPREINKFLKDKNIGNVVLRAGVKPEDYWEVRNEVEKGLEGN HHCCHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCC KTVHLFVKDGVAILCEVLFKV CEEEEEECCCHHHHHHHHHCC >Mature Secondary Structure MEYYRRDQIWTGAILRFSFSVAFKSHKTPTNPLIDVARKKQFEKPLHGDKESVRFATPEP CCCHHCCCHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCH IARYRAQRLKCGTLADISCGIGGQTVFFAQQCEFVYAVEIDPKKIEYAKKNCEMYGLDNV HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECHHHHHHHHHCCCEECCCCE KFICGDALDPKVIEQIPAVDVVFSDPFRPAEEDKRQVSSLEPGIPNVLSAYGEKTKNFAF EEEECCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHCCCCC EAPPQMPPERIPFDCEKEYISLDGQLNRLTLYFGDLKQNERLAVALPAGEGLVSQYGPLP CCCCCCCCCCCCCCCCHHHEECCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCCC EIRETEKMKLFAYEPEPSVIAAELLPELIESMMQMAGPLMGAFELFRVDKKRLLITSEAL CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHEEEEHHHH IKQPMIKNHYLIQKICPFDPREINKFLKDKNIGNVVLRAGVKPEDYWEVRNEVEKGLEGN HHCCHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCC KTVHLFVKDGVAILCEVLFKV CEEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA