Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227586

Identifier: 21227586

GI number: 21227586

Start: 1767822

End: 1768619

Strand: Reverse

Name: 21227586

Synonym: MM_1484

Alternate gene names: NA

Gene position: 1768619-1767822 (Counterclockwise)

Preceding gene: 21227589

Following gene: 21227585

Centisome position: 43.18

GC content: 41.1

Gene sequence:

>798_bases
ATGAACCCAAACTTGCTTGATTTGATCCTGTTTTCAGAGAAAAGAAAGGCTTTTCTCATGCTCCTGAGAGAGGGACCGAA
GAATACCCAGGAGATCCTTGACAGGCTTAAGGTTCCAAGAACAGCTCTTCTTCCCCAGATAAAAAAGCTTAAAGAGCAGA
ACCTGGTAATTCACGAAGAAGGAGTCTATCGCCTCAGCCTGATAGGAGAGATCATTATAGAAAAGATGCAGCCTCTTCTC
GATACTCTGGAAGTTTTTGAAAAACAGGAAGAGTTCTGGACAGACAGGAAACTCACTCCTATCCCCCCTCATCTTATTAA
ACGGATCAGTGAACTTGGGAATTACCGCCTTATAGAGCCTGACCTGAGCCATACTTTTGACCTTAACCCTGAATTTGTGA
AAAATGTCTCTAACTCAAATCATATCCTTATGTTTTTCTCCTATTTTCATCCTCAATTCCCTTCCTTCTTCCTTGATCTT
GCCAGAAGAGGCACTGAAATTTCCCTTGTCCTGAGTGAGTCCGTATACGCCAGGCTCGAAGAGGATTTCAAAAAAGAAGA
AAAGGAACTCCTCAAAATGGAGAATACAGGTCTCTTTATTCTGGACGAAAAGGAAGTGGAAATCCCTGCAGTTGTTGTAT
CTTCCGATAAAATAATGCTTATGGGGCTGTTTAATGAAAGTGGAAGGTTTGACAGGCAGTATATAATCAGTTTTGAAGCA
GGGGCAATAGAATGGGGAAAAGAGCTGTTCGAATACTTCAGGGATATGAGCAGGGAAATTAAAAATGAAGAAAAATAA

Upstream 100 bases:

>100_bases
TAATTTCGACATCTTTATCATCAATCTGGTATTCATTAACGCTATAGAGAACCAAAACCGGAAAAAAAACCTCTCTTCTA
TTTCCGGGCGGCGATAATAA

Downstream 100 bases:

>100_bases
GGGTTTTTTGAGCCTGCTGTCAGAACCTCAAATTAAAGCTCTAAAGTCACGAGTATCCTGCTTAATTTATCATGAACCTC
AAATTAAAGCTATTTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEEGVYRLSLIGEIIIEKMQPLL
DTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEPDLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDL
ARRGTEISLVLSESVYARLEEDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA
GAIEWGKELFEYFRDMSREIKNEEK

Sequences:

>Translated_265_residues
MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEEGVYRLSLIGEIIIEKMQPLL
DTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEPDLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDL
ARRGTEISLVLSESVYARLEEDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA
GAIEWGKELFEYFRDMSREIKNEEK
>Mature_265_residues
MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEEGVYRLSLIGEIIIEKMQPLL
DTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEPDLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDL
ARRGTEISLVLSESVYARLEEDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA
GAIEWGKELFEYFRDMSREIKNEEK

Specific function: Unknown

COG id: COG4742

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31259; Mature: 31259

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEE
CCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC
GVYRLSLIGEIIIEKMQPLLDTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECC
DLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDLARRGTEISLVLSESVYARLE
CCCCCCCCCHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHH
EDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA
HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECC
GAIEWGKELFEYFRDMSREIKNEEK
CHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEE
CCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC
GVYRLSLIGEIIIEKMQPLLDTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECC
DLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDLARRGTEISLVLSESVYARLE
CCCCCCCCCHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHH
EDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA
HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECC
GAIEWGKELFEYFRDMSREIKNEEK
CHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA