Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is obg [H]

Identifier: 21227552

GI number: 21227552

Start: 1732012

End: 1732992

Strand: Direct

Name: obg [H]

Synonym: MM_1450

Alternate gene names: 21227552

Gene position: 1732012-1732992 (Clockwise)

Preceding gene: 21227551

Following gene: 21227561

Centisome position: 42.28

GC content: 44.14

Gene sequence:

>981_bases
ATGAAATCAAGAATCGTTTACGGACCAATTCTTTCCAGAAGGCTTGGCAGGTCCCTGGGAATAGATGTAATAAAGAACAC
AGGTTCGAAAAAAAACTGTAATTATGACTGCATTTACTGCCAGCTCGGACACGTTGAGTTAAAACTCGGGAGTCCTGAAG
ATGTTAAAGAAGCAGTAACCCCGAAAGAAGTCTCTGAAAGCTTCGAGAAGTTCTATAAAGATGTTGAGGGACTTGACTAT
ATCACTTTTTCAGGGACCTGCGAACCTTCTCTTAACCTTTCTCTGGGGGAGATGATCCAGAGTATAAGGGAAATAAGCGG
AGTTCCTGTCTGTGTGATAACGAATTCTTCCCTTATGGGAAGAGAGGATGTACGGAAGAATCTGTCTCAGGCAGACCTGG
TTGTTGCTACCCTTGTTTCAGGAATCGAAAAAACCTGGAGAAAGATACACAGACCTGCTCCCTGCATAAATTTTCAGGAA
ATAATTGAGGGCTTAAGGGAACTTGCAAAAGCCGGTGATGGAAAAAAGCTTGCACTTGAGGTTATGTTTCTTGAGAGTGA
AACAGGGGAGCCTCTGAACAGCACTGATGAAGAGGTCGATTGCCTGATAAAAACAATCAGGTACATATGCCCTGATGAGA
TCGAAGTCCTGACTATCAGCCGCCCTCCTGCAGAAAAATGGGTAAAACCGGTATCAGAGGAAAGGTTAAGGGAAATTGCT
GACCGCTTTATATCAGAGTTTGGAGCTGAAAAAGTAAGGCTGGTTTTAAAGGGCAAAAAGAAAAAGGCAAAAGTTTTACA
CCGGGACCTGGAAGAGGAAGTCTATGCCCTTCTCCTCAGGAGGCCCTGTACCTTTGAACAGACATGGCAGGGACTGAGCA
TAGACCCTGAAAGTCTCCGCCCTGTCCTCGAAAAATTGCTTGCTGAAGGCAAAATAGAGGAAATAGGTTCCAAAAACAGC
GTGTATTACAGGGCAAAATGA

Upstream 100 bases:

>100_bases
TCGGACTGGAAAATGGAAGGGTTTCCTGCTGATTTGCCGCTATTCTCTTTCCAGATTTTCTGATTTTTGGGCCCAGATTT
TTTTGAAAGGAAGAGTAAAA

Downstream 100 bases:

>100_bases
ATTAAATATGGAAACAAAAAAGGAAATTTTTCCATTAAGAAAATTTATCTATTTTTCAGGGGCAGGGAGAGCGTACGACC
AGCACTTCCGCTTTTGAATT

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: GTP-binding protein obg [H]

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVTPKEVSESFEKFYKDVEGLDY
ITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMGREDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQE
IIEGLRELAKAGDGKKLALEVMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA
DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLRPVLEKLLAEGKIEEIGSKNS
VYYRAK

Sequences:

>Translated_326_residues
MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVTPKEVSESFEKFYKDVEGLDY
ITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMGREDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQE
IIEGLRELAKAGDGKKLALEVMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA
DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLRPVLEKLLAEGKIEEIGSKNS
VYYRAK
>Mature_326_residues
MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVTPKEVSESFEKFYKDVEGLDY
ITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMGREDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQE
IIEGLRELAKAGDGKKLALEVMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA
DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLRPVLEKLLAEGKIEEIGSKNS
VYYRAK

Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR014100
- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR006169
- InterPro:   IPR002917
- InterPro:   IPR007197 [H]

Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36807; Mature: 36807

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVT
CCCCEEECHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEEECCEEEECCCCHHHHHCCC
PKEVSESFEKFYKDVEGLDYITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMG
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
REDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQEIIEGLRELAKAGDGKKLALE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
VMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHH
DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLR
HHHHHHHCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH
PVLEKLLAEGKIEEIGSKNSVYYRAK
HHHHHHHHCCCHHHCCCCCCEEEECC
>Mature Secondary Structure
MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVT
CCCCEEECHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEEECCEEEECCCCHHHHHCCC
PKEVSESFEKFYKDVEGLDYITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMG
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
REDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQEIIEGLRELAKAGDGKKLALE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
VMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHH
DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLR
HHHHHHHCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH
PVLEKLLAEGKIEEIGSKNSVYYRAK
HHHHHHHHCCCHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA