| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227551
Identifier: 21227551
GI number: 21227551
Start: 1731432
End: 1731824
Strand: Direct
Name: 21227551
Synonym: MM_1449
Alternate gene names: NA
Gene position: 1731432-1731824 (Clockwise)
Preceding gene: 21227550
Following gene: 21227552
Centisome position: 42.27
GC content: 49.87
Gene sequence:
>393_bases ATGCCAAGAGGAGACAGAACAGGTCCGATGGGACAGGGATCAAAGACAGGACGGGCTATGGGACACTGCTCAGGCAGTGA CAGTCCGGGTTATACTACAGGAGGTCAGGCGGGTACAGGCCGGATGTTTAGCCGTGGAGCCGGCGGACGCAGTATGGGAC GAGGAACAGGCCGTGGTTTCCGGTGCAGGAAAAATTCTGGTCTCGAAAGAGGTAGAGGCTTTTTTTCCAGGAATGAACAC CCGGGATACTATTATCCAGAAACTTCTCAGTCCAGCACGGAATCAAATATCGAATTCTTTGAGAACAGGATCAGGGCTCT GAAACAGGAATTTGAGGCGTTTATAGAAAGTTTGAAAACCCAGCAGCCCCCGAAAATTGATGAAAAGAAATAA
Upstream 100 bases:
>100_bases TTTAAATCGTTTTCAGAATCATTTAAAGATTTTTACCAGACAACCACGACTTGCTAAATATTTATGGTATATTAACATTA CAATGAAAGGAGTTGAAATA
Downstream 100 bases:
>100_bases ATCAATGTATAAATTCAGGAATGAGTTCATTAACTCGATGGTTACCGGTGGGTTCTGAATTCATAAATGAGTTTGAAAAA ATGAATTTCGGACTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPRGDRTGPMGQGSKTGRAMGHCSGSDSPGYTTGGQAGTGRMFSRGAGGRSMGRGTGRGFRCRKNSGLERGRGFFSRNEH PGYYYPETSQSSTESNIEFFENRIRALKQEFEAFIESLKTQQPPKIDEKK
Sequences:
>Translated_130_residues MPRGDRTGPMGQGSKTGRAMGHCSGSDSPGYTTGGQAGTGRMFSRGAGGRSMGRGTGRGFRCRKNSGLERGRGFFSRNEH PGYYYPETSQSSTESNIEFFENRIRALKQEFEAFIESLKTQQPPKIDEKK >Mature_129_residues PRGDRTGPMGQGSKTGRAMGHCSGSDSPGYTTGGQAGTGRMFSRGAGGRSMGRGTGRGFRCRKNSGLERGRGFFSRNEHP GYYYPETSQSSTESNIEFFENRIRALKQEFEAFIESLKTQQPPKIDEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14268; Mature: 14137
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGDRTGPMGQGSKTGRAMGHCSGSDSPGYTTGGQAGTGRMFSRGAGGRSMGRGTGRGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE RCRKNSGLERGRGFFSRNEHPGYYYPETSQSSTESNIEFFENRIRALKQEFEAFIESLKT EECCCCCCCHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC QQPPKIDEKK CCCCCCCCCC >Mature Secondary Structure PRGDRTGPMGQGSKTGRAMGHCSGSDSPGYTTGGQAGTGRMFSRGAGGRSMGRGTGRGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE RCRKNSGLERGRGFFSRNEHPGYYYPETSQSSTESNIEFFENRIRALKQEFEAFIESLKT EECCCCCCCHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC QQPPKIDEKK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA