Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227542

Identifier: 21227542

GI number: 21227542

Start: 1721763

End: 1723385

Strand: Direct

Name: 21227542

Synonym: MM_1440

Alternate gene names: NA

Gene position: 1721763-1723385 (Clockwise)

Preceding gene: 21227530

Following gene: 161485675

Centisome position: 42.03

GC content: 47.81

Gene sequence:

>1623_bases
ATGTACGGAATTGCACTTGACCTGGGTACCAGCGGTTTTAGAGCCCAGCTTATCGACCTTGAAACAGATGAGACCTTAAA
AACAGTTATTACCATGGGTCACCCCCTGCCAGGAGGAAATGTTATGGACCACCTGGACTTTGCTATCACAACAGGGGAAG
ACGTGGCTCATGGAGTGATTATTGAAACCATCAGGAGGATGTTCCTGAAATTTGATGCAGACCTTTCAAAAGTGGAAAGG
CTCGCAGTCTGCGGAAACCCTATCCAGCTTTCTCTTTTTCAGAACATCGAAATAAGGGACCTTGCATATGCCGGAGAAAA
CAAACAGAAAATGCTCGGAGTCCAGAATGTAACACGAGATTCCCGTGTATTTCCGGCTTCGGACATTTTCGGGGATGATT
TTTTTCGCGGCTGTGAAATCATCGTACCCCCGGCAATCAAACATGAGATAGGAGCTGATGCCCTTGCCATGATGCTGGAA
ACCGATTTTCTGATCCAGACCGAACCTGCACTGGTGACGGATTATGGAACAAATGCGGAAATGGCTCTCAAAGTTGGCGA
CAGGATAATAACTGCAAGTGCTGCGGCAGGTCCTGCGATCGAGGGGCAGGGCATAAGTTCGGGAATGCTTGCAAGCCCCG
GGGCAATCTGTGACGTAAAGCCTGAAGGCGAATACTGGAAAGTCATGGTCCTCGATAATGAGATGGAAAAACAGGACGCT
TACCTTATTAACCCTGTAACCGGCGAAATGAAAGAAACGAACGGATATGAAGCTGCAGGCATCACAGGGACGGGAGTAAT
CTCGGCTTTTGCCCTGGCTCTGAGAAGCGGGCTGGTTGAAAAGCCTCCAAAACTCCCCAATGGGAAACTGATTCTGGGCC
CCGGGATTGAAATTACTGAAAAGGATGTCGAAGAAGCCGGAAAAGCAATAGGTGCGATCCGTGCCGCTCACATGACTCTC
ATAGTGGAGTCCGGAATTAAATACGAAGATCTTGAATACGCATACATGTCAGGGGCATCAGGAGCTTATGTAGACGCCGA
AGATGCCCGCAGGCTTGGTGCAGTTCCGGGTTATGCAAAAAAAATAGTCCAGTTCGGAAACACCTCTCTCGCCCTTGCGC
GGGAACTTGTGCTTGACAAGTCCAGGCTTGATGATGTCATCAAAATCGCAAAAAAGATCACTGCTGACCACCTGATGATG
GCAACAAGCAATACTTTCAACAACTTCTATCTGTGTGAACTCTCTTACTGGACAATGGGAATGCCTCTTGAAATGTACAA
CCAGATGCTTGAACTCTACGGGCTCCCCAAACTCCCTGAAACTCTTGAACACGTTAGTATAGAAAAACGGGTAAGTAAGG
ATATAGAGCAGGTAGGAGTCGGCGGTCTTGCCCTCCTGAAAGAAATAGGCATTATCCTTGAAGTCCCCGTAGAGAAATGT
ATCTACTGCCAGAAATGCATGGAAGAATGCCCTGAAAACGCTCTGGAAATCACCGAGACCGATGGGATAAGAACCGCAAA
ATACGACAGCCAGAAATGCCTTGGAACAAGCTGCCGCCGCTGTGTCAGTGTCTGCCCCGAAAATGCAATTGACATAACAA
AACTGAGAATCAAAGCAAAATAA

Upstream 100 bases:

>100_bases
TTGTTGAATTAGAATAAGTAACTCACCATATCCGATTCTTTTGCGGGGCAGTCCATGGTGCCGGGATGCCTCGATACCAT
ATTTCCGGAGGATGTAAAAA

Downstream 100 bases:

>100_bases
GACCTGTGGGACTTATTATTTCCCACTTTTTTTGCCCTCAACCAGTCCTCTTGAGCGAAGCGAAAAGGACCGCGTACTCC
CGATGCGCAATTCGGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Electron Transfer Protein; Corrinoid Activation/Regeneration Protein; Flavoprotein; Vitamin; Iron-Sulfur Protein; Ferredoxin-Containing Protein; Methyltransferase Activation Protein MapA; Ferredoxin Domain-Containing Protein; Methylamine Methyltransferase Corrinoid Activation Protein

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MYGIALDLGTSGFRAQLIDLETDETLKTVITMGHPLPGGNVMDHLDFAITTGEDVAHGVIIETIRRMFLKFDADLSKVER
LAVCGNPIQLSLFQNIEIRDLAYAGENKQKMLGVQNVTRDSRVFPASDIFGDDFFRGCEIIVPPAIKHEIGADALAMMLE
TDFLIQTEPALVTDYGTNAEMALKVGDRIITASAAAGPAIEGQGISSGMLASPGAICDVKPEGEYWKVMVLDNEMEKQDA
YLINPVTGEMKETNGYEAAGITGTGVISAFALALRSGLVEKPPKLPNGKLILGPGIEITEKDVEEAGKAIGAIRAAHMTL
IVESGIKYEDLEYAYMSGASGAYVDAEDARRLGAVPGYAKKIVQFGNTSLALARELVLDKSRLDDVIKIAKKITADHLMM
ATSNTFNNFYLCELSYWTMGMPLEMYNQMLELYGLPKLPETLEHVSIEKRVSKDIEQVGVGGLALLKEIGIILEVPVEKC
IYCQKCMEECPENALEITETDGIRTAKYDSQKCLGTSCRRCVSVCPENAIDITKLRIKAK

Sequences:

>Translated_540_residues
MYGIALDLGTSGFRAQLIDLETDETLKTVITMGHPLPGGNVMDHLDFAITTGEDVAHGVIIETIRRMFLKFDADLSKVER
LAVCGNPIQLSLFQNIEIRDLAYAGENKQKMLGVQNVTRDSRVFPASDIFGDDFFRGCEIIVPPAIKHEIGADALAMMLE
TDFLIQTEPALVTDYGTNAEMALKVGDRIITASAAAGPAIEGQGISSGMLASPGAICDVKPEGEYWKVMVLDNEMEKQDA
YLINPVTGEMKETNGYEAAGITGTGVISAFALALRSGLVEKPPKLPNGKLILGPGIEITEKDVEEAGKAIGAIRAAHMTL
IVESGIKYEDLEYAYMSGASGAYVDAEDARRLGAVPGYAKKIVQFGNTSLALARELVLDKSRLDDVIKIAKKITADHLMM
ATSNTFNNFYLCELSYWTMGMPLEMYNQMLELYGLPKLPETLEHVSIEKRVSKDIEQVGVGGLALLKEIGIILEVPVEKC
IYCQKCMEECPENALEITETDGIRTAKYDSQKCLGTSCRRCVSVCPENAIDITKLRIKAK
>Mature_540_residues
MYGIALDLGTSGFRAQLIDLETDETLKTVITMGHPLPGGNVMDHLDFAITTGEDVAHGVIIETIRRMFLKFDADLSKVER
LAVCGNPIQLSLFQNIEIRDLAYAGENKQKMLGVQNVTRDSRVFPASDIFGDDFFRGCEIIVPPAIKHEIGADALAMMLE
TDFLIQTEPALVTDYGTNAEMALKVGDRIITASAAAGPAIEGQGISSGMLASPGAICDVKPEGEYWKVMVLDNEMEKQDA
YLINPVTGEMKETNGYEAAGITGTGVISAFALALRSGLVEKPPKLPNGKLILGPGIEITEKDVEEAGKAIGAIRAAHMTL
IVESGIKYEDLEYAYMSGASGAYVDAEDARRLGAVPGYAKKIVQFGNTSLALARELVLDKSRLDDVIKIAKKITADHLMM
ATSNTFNNFYLCELSYWTMGMPLEMYNQMLELYGLPKLPETLEHVSIEKRVSKDIEQVGVGGLALLKEIGIILEVPVEKC
IYCQKCMEECPENALEITETDGIRTAKYDSQKCLGTSCRRCVSVCPENAIDITKLRIKAK

Specific function: Unknown

COG id: COG3894

COG function: function code R; Uncharacterized metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58829; Mature: 58829

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGIALDLGTSGFRAQLIDLETDETLKTVITMGHPLPGGNVMDHLDFAITTGEDVAHGVI
CCEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHCCCEEEECCCHHHHHHH
IETIRRMFLKFDADLSKVERLAVCGNPIQLSLFQNIEIRDLAYAGENKQKMLGVQNVTRD
HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCC
SRVFPASDIFGDDFFRGCEIIVPPAIKHEIGADALAMMLETDFLIQTEPALVTDYGTNAE
CCCCCCHHHCCCHHHCCCEEEECCHHHHHCCHHHHHHHHHCCEEEECCCCEEEECCCCCE
MALKVGDRIITASAAAGPAIEGQGISSGMLASPGAICDVKPEGEYWKVMVLDNEMEKQDA
EEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCC
YLINPVTGEMKETNGYEAAGITGTGVISAFALALRSGLVEKPPKLPNGKLILGPGIEITE
EEEECCCCCHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCH
KDVEEAGKAIGAIRAAHMTLIVESGIKYEDLEYAYMSGASGAYVDAEDARRLGAVPGYAK
HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEECCCCCCEECHHHHHHHCCCCHHHH
KIVQFGNTSLALARELVLDKSRLDDVIKIAKKITADHLMMATSNTFNNFYLCELSYWTMG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCC
MPLEMYNQMLELYGLPKLPETLEHVSIEKRVSKDIEQVGVGGLALLKEIGIILEVPVEKC
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCHHHH
IYCQKCMEECPENALEITETDGIRTAKYDSQKCLGTSCRRCVSVCPENAIDITKLRIKAK
HHHHHHHHHCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECC
>Mature Secondary Structure
MYGIALDLGTSGFRAQLIDLETDETLKTVITMGHPLPGGNVMDHLDFAITTGEDVAHGVI
CCEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHCCCEEEECCCHHHHHHH
IETIRRMFLKFDADLSKVERLAVCGNPIQLSLFQNIEIRDLAYAGENKQKMLGVQNVTRD
HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCC
SRVFPASDIFGDDFFRGCEIIVPPAIKHEIGADALAMMLETDFLIQTEPALVTDYGTNAE
CCCCCCHHHCCCHHHCCCEEEECCHHHHHCCHHHHHHHHHCCEEEECCCCEEEECCCCCE
MALKVGDRIITASAAAGPAIEGQGISSGMLASPGAICDVKPEGEYWKVMVLDNEMEKQDA
EEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCC
YLINPVTGEMKETNGYEAAGITGTGVISAFALALRSGLVEKPPKLPNGKLILGPGIEITE
EEEECCCCCHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCH
KDVEEAGKAIGAIRAAHMTLIVESGIKYEDLEYAYMSGASGAYVDAEDARRLGAVPGYAK
HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEECCCCCCEECHHHHHHHCCCCHHHH
KIVQFGNTSLALARELVLDKSRLDDVIKIAKKITADHLMMATSNTFNNFYLCELSYWTMG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCC
MPLEMYNQMLELYGLPKLPETLEHVSIEKRVSKDIEQVGVGGLALLKEIGIILEVPVEKC
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCHHHH
IYCQKCMEECPENALEITETDGIRTAKYDSQKCLGTSCRRCVSVCPENAIDITKLRIKAK
HHHHHHHHHCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA