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The map label for this gene is 21227521

Identifier: 21227521

GI number: 21227521

Start: 1702391

End: 1702852

Strand: Direct

Name: 21227521

Synonym: MM_1419

Alternate gene names: NA

Gene position: 1702391-1702852 (Clockwise)

Preceding gene: 161485676

Following gene: 21227523

Centisome position: 41.56

GC content: 45.45

Gene sequence:

>462_bases
ATGAGATGGCCTGCTAAAAGATCATTTTCAGGACCCGCACGCTGGGATCCTTTTGAAGAGATTAAAAGAACACAGGAACG
CCTGAACCAGCTGTTTGAAGACTTCATGCCCATGGAAGAATGGGGTGGCGGAAAAGTATACACTCCTGCCATTGACATAA
AGGAAGAAGACGACAAGCTTCTGGTTACTACAGACCTGCCTGGAATTAATAAAGAGGACGTAGAAATTAACCTCAAAGAG
GATATGCTTGAGATCAGCGCAAAATCCGGCAAGGAAAAGGAATCCGAAGAAGAAGGGTACCTGCGGAGGGAGAGAGCATA
TACACAATTTTACCGTGCTGTTCGCCTGCCTTCCAGTGTCAGGGAAGAAGGAGCCTGTGCAAAAATGGACAATGGAGTCC
TGACCATAATGCTGCCAAAAGCGAAAATTGAAGAGCCGAAAAAGAAGATAGAGATTGAGTAA

Upstream 100 bases:

>100_bases
TTTTGTGAAATTACCTGAGAAAACTTATATATCCTTTCTCAATATATTCAAAATAGCAAACTATATCTGCATAATTTTTT
TACTTAAGGGGGAATAAAAG

Downstream 100 bases:

>100_bases
CTAGAGATCAAGTAATCCTCTCAGAAGAGGAAAACACACTTTGATTTAACGAATTAATAGAGCCTCTAAATAAGAGGCTT
CCTATTTTTCCTCAGTCCAT

Product: small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRWPAKRSFSGPARWDPFEEIKRTQERLNQLFEDFMPMEEWGGGKVYTPAIDIKEEDDKLLVTTDLPGINKEDVEINLKE
DMLEISAKSGKEKESEEEGYLRRERAYTQFYRAVRLPSSVREEGACAKMDNGVLTIMLPKAKIEEPKKKIEIE

Sequences:

>Translated_153_residues
MRWPAKRSFSGPARWDPFEEIKRTQERLNQLFEDFMPMEEWGGGKVYTPAIDIKEEDDKLLVTTDLPGINKEDVEINLKE
DMLEISAKSGKEKESEEEGYLRRERAYTQFYRAVRLPSSVREEGACAKMDNGVLTIMLPKAKIEEPKKKIEIE
>Mature_153_residues
MRWPAKRSFSGPARWDPFEEIKRTQERLNQLFEDFMPMEEWGGGKVYTPAIDIKEEDDKLLVTTDLPGINKEDVEINLKE
DMLEISAKSGKEKESEEEGYLRRERAYTQFYRAVRLPSSVREEGACAKMDNGVLTIMLPKAKIEEPKKKIEIE

Specific function: Chaperone that confers thermal protection to other proteins [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17815; Mature: 17815

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWPAKRSFSGPARWDPFEEIKRTQERLNQLFEDFMPMEEWGGGKVYTPAIDIKEEDDKL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEECCEECCCCCCCCE
LVTTDLPGINKEDVEINLKEDMLEISAKSGKEKESEEEGYLRRERAYTQFYRAVRLPSSV
EEEECCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
REEGACAKMDNGVLTIMLPKAKIEEPKKKIEIE
HHCCCCEECCCCEEEEEECCCHHCCHHHHCCCC
>Mature Secondary Structure
MRWPAKRSFSGPARWDPFEEIKRTQERLNQLFEDFMPMEEWGGGKVYTPAIDIKEEDDKL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEECCEECCCCCCCCE
LVTTDLPGINKEDVEINLKEDMLEISAKSGKEKESEEEGYLRRERAYTQFYRAVRLPSSV
EEEECCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
REEGACAKMDNGVLTIMLPKAKIEEPKKKIEIE
HHCCCCEECCCCEEEEEECCCHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9689045; 9707123 [H]