The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227516

Identifier: 21227516

GI number: 21227516

Start: 1696967

End: 1697425

Strand: Direct

Name: 21227516

Synonym: MM_1414

Alternate gene names: NA

Gene position: 1696967-1697425 (Clockwise)

Preceding gene: 21227514

Following gene: 21227517

Centisome position: 41.43

GC content: 41.39

Gene sequence:

>459_bases
ATGACCGGCGTAAAAGTTCTCCTCATGATGGGATGTCCAGAGGTCCCGATTCAAACCAGTATTGCCCTGTATCTTTCTCA
TAAGCTTACCCAGTCAGGATTCGATGTCACCGTTGCCGGAACAAATGCCGCAACCAAGCTTTTGAAAATTTCTGATTCTG
ACGGGTATTATGCAAAAAAGCTGGTAGACCTTGATAAAACTCTGGAAGACATTATTGAAAAAAGAGCGGATTTTGACATA
TGCTTTGCCTTCATGCATAATGATTCAGGAGTGACTTATGCAGCGACGGTAAGCGCTATTTCTCAGGTCAGAATGTATTC
AATCGTCTTTGGAAGGCACGCTGAGGAATTAGCTCAAACTATAGAGTTCGATTGTGAGAAAATAGTTACACAGGATGTTC
ACAATCCTGTTCGACTTAAAAACAAACTGGATAAAATAATGGGGGAAATAGCCAGATGA

Upstream 100 bases:

>100_bases
TTTTTTCAATAGCTTCTGTGAATCTCAATTGCAAAGGTTGAAATTCAGGATTAACCAATAAGCCATTCTTACAGACAAAA
TATCTCAGAGAGGAAATGTT

Downstream 100 bases:

>100_bases
GTTGTATTGAACAGATGAAATATACAATCCTCCTGGACAGGATAAGCTTCAAAGAAGCAAGAGAGTATATTGAGAAAAAC
TCGGATGAAGTCTACTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTGVKVLLMMGCPEVPIQTSIALYLSHKLTQSGFDVTVAGTNAATKLLKISDSDGYYAKKLVDLDKTLEDIIEKRADFDI
CFAFMHNDSGVTYAATVSAISQVRMYSIVFGRHAEELAQTIEFDCEKIVTQDVHNPVRLKNKLDKIMGEIAR

Sequences:

>Translated_152_residues
MTGVKVLLMMGCPEVPIQTSIALYLSHKLTQSGFDVTVAGTNAATKLLKISDSDGYYAKKLVDLDKTLEDIIEKRADFDI
CFAFMHNDSGVTYAATVSAISQVRMYSIVFGRHAEELAQTIEFDCEKIVTQDVHNPVRLKNKLDKIMGEIAR
>Mature_151_residues
TGVKVLLMMGCPEVPIQTSIALYLSHKLTQSGFDVTVAGTNAATKLLKISDSDGYYAKKLVDLDKTLEDIIEKRADFDIC
FAFMHNDSGVTYAATVSAISQVRMYSIVFGRHAEELAQTIEFDCEKIVTQDVHNPVRLKNKLDKIMGEIAR

Specific function: Unknown

COG id: COG4081

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012033 [H]

Pfam domain/function: PF09001 DUF1890 [H]

EC number: NA

Molecular weight: Translated: 16878; Mature: 16747

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGVKVLLMMGCPEVPIQTSIALYLSHKLTQSGFDVTVAGTNAATKLLKISDSDGYYAKK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHEEEEEEECCCCHHHHH
LVDLDKTLEDIIEKRADFDICFAFMHNDSGVTYAATVSAISQVRMYSIVFGRHAEELAQT
HHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IEFDCEKIVTQDVHNPVRLKNKLDKIMGEIAR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGVKVLLMMGCPEVPIQTSIALYLSHKLTQSGFDVTVAGTNAATKLLKISDSDGYYAKK
CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHEEEEEEECCCCHHHHH
LVDLDKTLEDIIEKRADFDICFAFMHNDSGVTYAATVSAISQVRMYSIVFGRHAEELAQT
HHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IEFDCEKIVTQDVHNPVRLKNKLDKIMGEIAR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]