Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227514

Identifier: 21227514

GI number: 21227514

Start: 1695362

End: 1695928

Strand: Direct

Name: 21227514

Synonym: MM_1412

Alternate gene names: NA

Gene position: 1695362-1695928 (Clockwise)

Preceding gene: 21227513

Following gene: 21227516

Centisome position: 41.39

GC content: 44.97

Gene sequence:

>567_bases
ATGAGTGATGTAATTATTCTCTGGGACTGCCCTCTTCTTTTTGAAAAACTCTTCATAGAGTATGGGCTTGAATGCAGCCG
TGCACTCTCAACGTCACTTGGAACTCCTTATCTGCCTGCCTGTAAAATTCTTGTCCTGCCTACAGGTTTTGCAAATAAAC
AGTACACAAAAACAGGAGTCGGGCTTGAACGCGGCAAACGCTCCCTTGAAAAGTTCGTGGCAAAAGGTGGGACCCTTCTA
ATCTTCAGTCCTCTTGTGCCCGATTACGAATATGAATGGCTTCCTTTCTCTCTAAAATATGTGATGGAAGAAAACCCATG
TACACCCCGTCCTGTAGGTGAGCACGAAGCTCAGAAACTTATTGAAAACATTATTCCTCCTGCAGGATGCGATGGCTATT
TTTCAGAAACCGATGCCCGGGTTGTTCTTGAAGACGAAAGAGGCAGGCCCATAATGGCTGTGAAAGAAATCGGAGAAGGC
ATGATTGTTGCGACCACAATTCACGAACTACCTGCAGCCGGGTTCTTCAAGTGCAGGACTGAATGTACCGGAAAAGTTAA
AATTTAA

Upstream 100 bases:

>100_bases
TATTCCCGAATCCCGGCTGATATCATCCGAACCTTCTCTTACTCCCTGAATCTTTGTTCACATGGATAAATTCATATGTG
GGAGTTCACTATCCTTTTTT

Downstream 100 bases:

>100_bases
ACAATAGATAAGAGCAGGTTTATGAGATTATTTTATCTTTTTTACATTTTTATCTTTTTTATATTGGTCTCTAAGTCTCC
TGATTACTTCTGCTTCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGVGLERGKRSLEKFVAKGGTLL
IFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKLIENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEG
MIVATTIHELPAAGFFKCRTECTGKVKI

Sequences:

>Translated_188_residues
MSDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGVGLERGKRSLEKFVAKGGTLL
IFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKLIENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEG
MIVATTIHELPAAGFFKCRTECTGKVKI
>Mature_187_residues
SDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGVGLERGKRSLEKFVAKGGTLLI
FSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKLIENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEGM
IVATTIHELPAAGFFKCRTECTGKVKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20925; Mature: 20793

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGV
CCCEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
GLERGKRSLEKFVAKGGTLLIFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKL
CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH
IENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEGMIVATTIHELPAAGFFKCRT
HHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCCEEEEEEHHHCCCCCEEEEEC
ECTGKVKI
CCCCEECC
>Mature Secondary Structure 
SDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGV
CCEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
GLERGKRSLEKFVAKGGTLLIFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKL
CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH
IENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEGMIVATTIHELPAAGFFKCRT
HHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCCEEEEEEHHHCCCCCEEEEEC
ECTGKVKI
CCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA