| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227514
Identifier: 21227514
GI number: 21227514
Start: 1695362
End: 1695928
Strand: Direct
Name: 21227514
Synonym: MM_1412
Alternate gene names: NA
Gene position: 1695362-1695928 (Clockwise)
Preceding gene: 21227513
Following gene: 21227516
Centisome position: 41.39
GC content: 44.97
Gene sequence:
>567_bases ATGAGTGATGTAATTATTCTCTGGGACTGCCCTCTTCTTTTTGAAAAACTCTTCATAGAGTATGGGCTTGAATGCAGCCG TGCACTCTCAACGTCACTTGGAACTCCTTATCTGCCTGCCTGTAAAATTCTTGTCCTGCCTACAGGTTTTGCAAATAAAC AGTACACAAAAACAGGAGTCGGGCTTGAACGCGGCAAACGCTCCCTTGAAAAGTTCGTGGCAAAAGGTGGGACCCTTCTA ATCTTCAGTCCTCTTGTGCCCGATTACGAATATGAATGGCTTCCTTTCTCTCTAAAATATGTGATGGAAGAAAACCCATG TACACCCCGTCCTGTAGGTGAGCACGAAGCTCAGAAACTTATTGAAAACATTATTCCTCCTGCAGGATGCGATGGCTATT TTTCAGAAACCGATGCCCGGGTTGTTCTTGAAGACGAAAGAGGCAGGCCCATAATGGCTGTGAAAGAAATCGGAGAAGGC ATGATTGTTGCGACCACAATTCACGAACTACCTGCAGCCGGGTTCTTCAAGTGCAGGACTGAATGTACCGGAAAAGTTAA AATTTAA
Upstream 100 bases:
>100_bases TATTCCCGAATCCCGGCTGATATCATCCGAACCTTCTCTTACTCCCTGAATCTTTGTTCACATGGATAAATTCATATGTG GGAGTTCACTATCCTTTTTT
Downstream 100 bases:
>100_bases ACAATAGATAAGAGCAGGTTTATGAGATTATTTTATCTTTTTTACATTTTTATCTTTTTTATATTGGTCTCTAAGTCTCC TGATTACTTCTGCTTCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGVGLERGKRSLEKFVAKGGTLL IFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKLIENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEG MIVATTIHELPAAGFFKCRTECTGKVKI
Sequences:
>Translated_188_residues MSDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGVGLERGKRSLEKFVAKGGTLL IFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKLIENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEG MIVATTIHELPAAGFFKCRTECTGKVKI >Mature_187_residues SDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGVGLERGKRSLEKFVAKGGTLLI FSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKLIENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEGM IVATTIHELPAAGFFKCRTECTGKVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20925; Mature: 20793
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGV CCCEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC GLERGKRSLEKFVAKGGTLLIFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKL CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH IENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEGMIVATTIHELPAAGFFKCRT HHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCCEEEEEEHHHCCCCCEEEEEC ECTGKVKI CCCCEECC >Mature Secondary Structure SDVIILWDCPLLFEKLFIEYGLECSRALSTSLGTPYLPACKILVLPTGFANKQYTKTGV CCEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC GLERGKRSLEKFVAKGGTLLIFSPLVPDYEYEWLPFSLKYVMEENPCTPRPVGEHEAQKL CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH IENIIPPAGCDGYFSETDARVVLEDERGRPIMAVKEIGEGMIVATTIHELPAAGFFKCRT HHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCCEEEEEEHHHCCCCCEEEEEC ECTGKVKI CCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA