| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hisC
Identifier: 21227507
GI number: 21227507
Start: 1686325
End: 1687431
Strand: Reverse
Name: hisC
Synonym: MM_1405
Alternate gene names: 21227507
Gene position: 1687431-1686325 (Counterclockwise)
Preceding gene: 21227508
Following gene: 21227501
Centisome position: 41.19
GC content: 45.44
Gene sequence:
>1107_bases TTGTTGATGTCCTTGAGCAGGCGTGAACTGATAAAAAAAGAAATCTTTGACATTGAAGAATACGTTCCCGGAAGATCCAT AGAAGAGATAGCTTCAACCTACGGGCTTAAGCCAGAATCAATTATTAAACTGGGATCAAATGAAAACCCTCTGGGACCCT CACCGAAAGCCGTAAAGGCTCTCATAGAGGCAGCTCCCGGAGCAAATATATACCCATCAGCGGATGCACATGAATTAAGA GAAGCCCTCTCGAAATACACAGGTTTTCCGGTATCAAATATTGTCGCCTCAGGGCCAGGAATGGACGGGCTTCTTGACGG GCTTTGCAGGATAATTATTGAAAAGGGAGACGAGGTTATAGTGCCCATCCCTACCTTTTCCTATTATGAGCTTCCTGCCA GAGCCTGCGGCGCAGAACCTGTCTTTATCAGGCGGAACCAGGATTTCTCCCTGAACCCCGAAAAGATTCTTGAAGCCGTG TCTCCCAGAACCAAAATCATTTTCCTGTGTTCTCCAAATAACCCTTCAGGCAATCTCCTTCCGGAAGCTGACCTGAGGAA AATTATTGAAAATACCGATGCCCTTGTGTTTGTGGACGAAGCATACGTTGAATTTGCGGACAGGAACCTTGCAGCACTGG TAAATGAATATGACAATGTTGCGGTTGGAAGGACTTTTTCCAAAGTATTCGGGCTTGCAGGTCTACGCCTGGGATATGGC ATAATGCCTGAGTGGCTTACAAAAGAATATTTAAGAGCAGCCACCCCGTTCTCGGTAAGTCTTCCGGCATTGCGGGCAGG ACTGGCTGCGCTTTCGGATACTGAATACCTGAATAAAAGCATAAATCTTGCAAGGGAAGGCAGAGAATACCTGAAAGAAA AAATTCCTTTTAAGGTTTATCCTTCTCAGGCAAATTTTGTGCTTGTGGATGTTTCTCCCCTGAAAGCAAAAAAGGTCACG GAAAGCCTTCTGAAGAAAGGAATAATAGTTCGCCCCTGTGATTCTTTCAGGGAGGCAGGAGATTCTTTTATCAGGGTAAC AGTCGGCACTCCTGAGCAGAATGAAAAGGTTGTCAGGGCTTTTGAGATTTCAAAGAGCGAGGTATAA
Upstream 100 bases:
>100_bases GATTTTGCAAGGGAACATGGTGTGCTTGTAAACTGCACCTCGGACTCGGTGCTCCGCCTTGTCCCTCCACTTGTGATTAC GAAAGAACAGATAGACTCGG
Downstream 100 bases:
>100_bases ACCCTGCTCTTAAAACCCTGCCCCTTTACTTGAATTTAATTTTTAATTCTCAAATTCTAAGTTTTAGATGTCTTTAATTC TCAAATTCTAAGTTTTAGAT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MLMSLSRRELIKKEIFDIEEYVPGRSIEEIASTYGLKPESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELR EALSKYTGFPVSNIVASGPGMDGLLDGLCRIIIEKGDEVIVPIPTFSYYELPARACGAEPVFIRRNQDFSLNPEKILEAV SPRTKIIFLCSPNNPSGNLLPEADLRKIIENTDALVFVDEAYVEFADRNLAALVNEYDNVAVGRTFSKVFGLAGLRLGYG IMPEWLTKEYLRAATPFSVSLPALRAGLAALSDTEYLNKSINLAREGREYLKEKIPFKVYPSQANFVLVDVSPLKAKKVT ESLLKKGIIVRPCDSFREAGDSFIRVTVGTPEQNEKVVRAFEISKSEV
Sequences:
>Translated_368_residues MLMSLSRRELIKKEIFDIEEYVPGRSIEEIASTYGLKPESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELR EALSKYTGFPVSNIVASGPGMDGLLDGLCRIIIEKGDEVIVPIPTFSYYELPARACGAEPVFIRRNQDFSLNPEKILEAV SPRTKIIFLCSPNNPSGNLLPEADLRKIIENTDALVFVDEAYVEFADRNLAALVNEYDNVAVGRTFSKVFGLAGLRLGYG IMPEWLTKEYLRAATPFSVSLPALRAGLAALSDTEYLNKSINLAREGREYLKEKIPFKVYPSQANFVLVDVSPLKAKKVT ESLLKKGIIVRPCDSFREAGDSFIRVTVGTPEQNEKVVRAFEISKSEV >Mature_368_residues MLMSLSRRELIKKEIFDIEEYVPGRSIEEIASTYGLKPESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELR EALSKYTGFPVSNIVASGPGMDGLLDGLCRIIIEKGDEVIVPIPTFSYYELPARACGAEPVFIRRNQDFSLNPEKILEAV SPRTKIIFLCSPNNPSGNLLPEADLRKIIENTDALVFVDEAYVEFADRNLAALVNEYDNVAVGRTFSKVFGLAGLRLGYG IMPEWLTKEYLRAATPFSVSLPALRAGLAALSDTEYLNKSINLAREGREYLKEKIPFKVYPSQANFVLVDVSPLKAKKVT ESLLKKGIIVRPCDSFREAGDSFIRVTVGTPEQNEKVVRAFEISKSEV
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Homo sapiens, GI56713254, Length=322, Percent_Identity=25.1552795031056, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI56713256, Length=322, Percent_Identity=25.1552795031056, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1788332, Length=305, Percent_Identity=31.1475409836066, Blast_Score=123, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322075, Length=397, Percent_Identity=28.9672544080605, Blast_Score=116, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_METMA (Q8PX17)
Other databases:
- EMBL: AE008384 - RefSeq: NP_633429.1 - ProteinModelPortal: Q8PX17 - SMR: Q8PX17 - GeneID: 1479747 - GenomeReviews: AE008384_GR - KEGG: mma:MM_1405 - NMPDR: fig|192952.1.peg.1405 - HOGENOM: HBG646350 - OMA: MSARYHH - ProtClustDB: PRK00950 - BioCyc: MMAZ192952:MM1405-MONOMER - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 40531; Mature: 40531
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSLSRRELIKKEIFDIEEYVPGRSIEEIASTYGLKPESIIKLGSNENPLGPSPKAVKA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHH LIEAAPGANIYPSADAHELREALSKYTGFPVSNIVASGPGMDGLLDGLCRIIIEKGDEVI HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE VPIPTFSYYELPARACGAEPVFIRRNQDFSLNPEKILEAVSPRTKIIFLCSPNNPSGNLL EECCCCCHHCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCC PEADLRKIIENTDALVFVDEAYVEFADRNLAALVNEYDNVAVGRTFSKVFGLAGLRLGYG CHHHHHHHHCCCCCEEEEEHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC IMPEWLTKEYLRAATPFSVSLPALRAGLAALSDTEYLNKSINLAREGREYLKEKIPFKVY CCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE PSQANFVLVDVSPLKAKKVTESLLKKGIIVRPCDSFREAGDSFIRVTVGTPEQNEKVVRA CCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCHHHHHCCCCEEEEEECCCCCCCHHHHH FEISKSEV HHCCCCCC >Mature Secondary Structure MLMSLSRRELIKKEIFDIEEYVPGRSIEEIASTYGLKPESIIKLGSNENPLGPSPKAVKA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHH LIEAAPGANIYPSADAHELREALSKYTGFPVSNIVASGPGMDGLLDGLCRIIIEKGDEVI HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE VPIPTFSYYELPARACGAEPVFIRRNQDFSLNPEKILEAVSPRTKIIFLCSPNNPSGNLL EECCCCCHHCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCC PEADLRKIIENTDALVFVDEAYVEFADRNLAALVNEYDNVAVGRTFSKVFGLAGLRLGYG CHHHHHHHHCCCCCEEEEEHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC IMPEWLTKEYLRAATPFSVSLPALRAGLAALSDTEYLNKSINLAREGREYLKEKIPFKVY CCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE PSQANFVLVDVSPLKAKKVTESLLKKGIIVRPCDSFREAGDSFIRVTVGTPEQNEKVVRA CCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCHHHHHCCCCEEEEEECCCCCCCHHHHH FEISKSEV HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824