| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is surE [H]
Identifier: 21227493
GI number: 21227493
Start: 1674930
End: 1675733
Strand: Direct
Name: surE [H]
Synonym: MM_1391
Alternate gene names: 21227493
Gene position: 1674930-1675733 (Clockwise)
Preceding gene: 21227488
Following gene: 21227496
Centisome position: 40.89
GC content: 48.26
Gene sequence:
>804_bases ATGGGAAAGCTGATGGTCCCAAAAATTCTTGTTACAAATGATGATGGTGTTTATTCGACAGGCCTGAAAGCCGCTTTTGA CAGCGTTTCTGACCTCGGGGAAGTTACAATTTCGGCTCCTGCCGTCCAGCAGAGCGGAGTAGGACGCTCTATTTCTATCT TTGAGCCTCTCAGGATCACAAAAACAGACGTCGGAGGCATACCTGCCTATGCTGTGGGAGGCACTCCTACGGACTCTGTT ATTCTCGGCGTTTTTACTATCCTGAAGGCAATGCCTGACCTGGTATTATCGGGTTTCAATATTGGAGAAAATATAAGCAC GGATACTATCACCACTTCGGGAACAATTGGAGGAGCCCTTGAAGCTGCAAGCTATGGCGTTCCTGCAATTGCTGCCTCAA TGCAGGTTCTTGATGAAGGGCAGAAATTCGATGATCCCAGGGACTATCAGAGGGAACGCTTCGAAGCCGGGATAAAGGTC GTTAACAGGATTGCCCGCAATGTGCTGAAGAGGGGAATGCCGGAAAATGTTGATCTGCTGAATATCAATATTCCCTTCCA TGCGGAAGAAGATACTCCTATAGAGATTACCCGCCTTGCGAGGAAGATCTTTAAAACCGATGTCGAAGAGAGGCGTGACC CAAGGGGAAGGCCCTATTACTGGATTGCAGGAGACCTTATACGGGAAGAAGAGGAAGGGACTGATGTGCACGCCATCATG CAGAAAGGGCATGTCTCAATAACCCCCATCTCCCTGGACTCGACGGCAAGGATTGATTTTTCTGAAATCGAAAGATATCT CTGA
Upstream 100 bases:
>100_bases ATTCTCCCTGAATGTAAATCTAATCTGGAAATCATCTGTCTGTACCATAGAAATAAAATCATCACAGCGTTTCCATAAAT TTTAAATTATCCTGCAACTT
Downstream 100 bases:
>100_bases CAGCAGTTAACTGCTCCATAATTCAGACAGGATATGGTAGAATATACCTGTGGAACTGCCCCATAATTCAGATAAAACAT ATATGTGGAGCTCGATAATT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MGKLMVPKILVTNDDGVYSTGLKAAFDSVSDLGEVTISAPAVQQSGVGRSISIFEPLRITKTDVGGIPAYAVGGTPTDSV ILGVFTILKAMPDLVLSGFNIGENISTDTITTSGTIGGALEAASYGVPAIAASMQVLDEGQKFDDPRDYQRERFEAGIKV VNRIARNVLKRGMPENVDLLNINIPFHAEEDTPIEITRLARKIFKTDVEERRDPRGRPYYWIAGDLIREEEEGTDVHAIM QKGHVSITPISLDSTARIDFSEIERYL
Sequences:
>Translated_267_residues MGKLMVPKILVTNDDGVYSTGLKAAFDSVSDLGEVTISAPAVQQSGVGRSISIFEPLRITKTDVGGIPAYAVGGTPTDSV ILGVFTILKAMPDLVLSGFNIGENISTDTITTSGTIGGALEAASYGVPAIAASMQVLDEGQKFDDPRDYQRERFEAGIKV VNRIARNVLKRGMPENVDLLNINIPFHAEEDTPIEITRLARKIFKTDVEERRDPRGRPYYWIAGDLIREEEEGTDVHAIM QKGHVSITPISLDSTARIDFSEIERYL >Mature_266_residues GKLMVPKILVTNDDGVYSTGLKAAFDSVSDLGEVTISAPAVQQSGVGRSISIFEPLRITKTDVGGIPAYAVGGTPTDSVI LGVFTILKAMPDLVLSGFNIGENISTDTITTSGTIGGALEAASYGVPAIAASMQVLDEGQKFDDPRDYQRERFEAGIKVV NRIARNVLKRGMPENVDLLNINIPFHAEEDTPIEITRLARKIFKTDVEERRDPRGRPYYWIAGDLIREEEEGTDVHAIMQ KGHVSITPISLDSTARIDFSEIERYL
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=252, Percent_Identity=32.5396825396825, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 29097; Mature: 28966
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLMVPKILVTNDDGVYSTGLKAAFDSVSDLGEVTISAPAVQQSGVGRSISIFEPLRIT CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHCCCCCEEEEECCCEEE KTDVGGIPAYAVGGTPTDSVILGVFTILKAMPDLVLSGFNIGENISTDTITTSGTIGGAL ECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHH EAASYGVPAIAASMQVLDEGQKFDDPRDYQRERFEAGIKVVNRIARNVLKRGMPENVDLL HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE NINIPFHAEEDTPIEITRLARKIFKTDVEERRDPRGRPYYWIAGDLIREEEEGTDVHAIM EEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHCCCCCCHHHHHH QKGHVSITPISLDSTARIDFSEIERYL HCCCEEEEEEECCCCCCCCHHHHHHCC >Mature Secondary Structure GKLMVPKILVTNDDGVYSTGLKAAFDSVSDLGEVTISAPAVQQSGVGRSISIFEPLRIT CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHCCCCCEEEEECCCEEE KTDVGGIPAYAVGGTPTDSVILGVFTILKAMPDLVLSGFNIGENISTDTITTSGTIGGAL ECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHH EAASYGVPAIAASMQVLDEGQKFDDPRDYQRERFEAGIKVVNRIARNVLKRGMPENVDLL HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE NINIPFHAEEDTPIEITRLARKIFKTDVEERRDPRGRPYYWIAGDLIREEEEGTDVHAIM EEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHCCCCCCHHHHHH QKGHVSITPISLDSTARIDFSEIERYL HCCCEEEEEEECCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]