The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227461

Identifier: 21227461

GI number: 21227461

Start: 1625543

End: 1625971

Strand: Direct

Name: 21227461

Synonym: MM_1359

Alternate gene names: NA

Gene position: 1625543-1625971 (Clockwise)

Preceding gene: 21227460

Following gene: 21227465

Centisome position: 39.68

GC content: 44.06

Gene sequence:

>429_bases
ATGACGCGCTTTATTAAGTACCACCCCCGGTCCAACACTTACGTGATTGAAAAAAGGGCTTTTCTGGAAGAAGACCTTAC
ACTGGACGGCAACGTTATTGTCGGACCGGAAGTAAAGTTCTGGAAAAATCTCACCGTATCAGGCAGACTTGAACTCGGGA
AAGGTTCTATTGTTCAGGGCAACGTGAAAGCTGGAAGTGCCATTATCTGTGCAGCAGCAAAAGTTCTGGGTAATATAGAA
ACAGTATCCGAACTTGTTCTTCTTGACAGGGCAAGGATAAATATTGCAGTCTGTGGAGGAGATATTCGTGTGAGGCCTGG
CTGTTCTCTTGGTTCAGTAAAAGCGGGAGGAACTCTTGAGCTTGTTGGAAAAGTTGCTGTAAAAAGAGTGGAGCCGTTAA
CAAAAGTAATTATTAGGGCCGAAAAATAA

Upstream 100 bases:

>100_bases
TTGAAATCCAATTGGCAAAGTTTTTACATAGCCATAAAAGCAAATTGTTTACGGCTTTCTTCAATCGATAGCTGGGGACA
GTAACCCGGAGTAATTTCCA

Downstream 100 bases:

>100_bases
TTTTCGGCTCGTTCAAAACTCGTTTTTCATTTTTTCCAGTAACTTACCTGGTAAACCTTTCTTCTTCCAGAAGTTTGAGG
ATGTGATCCCTCAGGCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTRFIKYHPRSNTYVIEKRAFLEEDLTLDGNVIVGPEVKFWKNLTVSGRLELGKGSIVQGNVKAGSAIICAAAKVLGNIE
TVSELVLLDRARINIAVCGGDIRVRPGCSLGSVKAGGTLELVGKVAVKRVEPLTKVIIRAEK

Sequences:

>Translated_142_residues
MTRFIKYHPRSNTYVIEKRAFLEEDLTLDGNVIVGPEVKFWKNLTVSGRLELGKGSIVQGNVKAGSAIICAAAKVLGNIE
TVSELVLLDRARINIAVCGGDIRVRPGCSLGSVKAGGTLELVGKVAVKRVEPLTKVIIRAEK
>Mature_141_residues
TRFIKYHPRSNTYVIEKRAFLEEDLTLDGNVIVGPEVKFWKNLTVSGRLELGKGSIVQGNVKAGSAIICAAAKVLGNIET
VSELVLLDRARINIAVCGGDIRVRPGCSLGSVKAGGTLELVGKVAVKRVEPLTKVIIRAEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15284; Mature: 15153

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFIKYHPRSNTYVIEKRAFLEEDLTLDGNVIVGPEVKFWKNLTVSGRLELGKGSIVQG
CCCEEEECCCCCEEEEEECCHHCCCCEECCCEEECCCCHHHCCCEEECEEEECCCCEEEC
NVKAGSAIICAAAKVLGNIETVSELVLLDRARINIAVCGGDIRVRPGCSLGSVKAGGTLE
CCCCCCCCEEEHHHHHCCHHHHHHHHHEECCEEEEEEECCEEEECCCCCCCCCCCCCCHH
LVGKVAVKRVEPLTKVIIRAEK
HHHHHHHHHHCCHHHEEEEECC
>Mature Secondary Structure 
TRFIKYHPRSNTYVIEKRAFLEEDLTLDGNVIVGPEVKFWKNLTVSGRLELGKGSIVQG
CCEEEECCCCCEEEEEECCHHCCCCEECCCEEECCCCHHHCCCEEECEEEECCCCEEEC
NVKAGSAIICAAAKVLGNIETVSELVLLDRARINIAVCGGDIRVRPGCSLGSVKAGGTLE
CCCCCCCCEEEHHHHHCCHHHHHHHHHEECCEEEEEEECCEEEECCCCCCCCCCCCCCHH
LVGKVAVKRVEPLTKVIIRAEK
HHHHHHHHHHCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA