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The map label for this gene is 21227465

Identifier: 21227465

GI number: 21227465

Start: 1629101

End: 1629631

Strand: Direct

Name: 21227465

Synonym: MM_1363

Alternate gene names: NA

Gene position: 1629101-1629631 (Clockwise)

Preceding gene: 21227461

Following gene: 21227471

Centisome position: 39.77

GC content: 44.26

Gene sequence:

>531_bases
TTGAATTTAATGAATGTTGCAGACAAGGTCATCAAATCCGCATTTGAGTCCGACGAAGTGTTTCAGAAAACACTTTCCGC
TGTTATTAAGGAAGACCTTAACCTGACTGCAGTGGATTTTGCGAAAAAGGCGAACATCCCCCCGAGCACCCTCTATAAGA
TCCTATCGGGTAACCGGGACCCTAACATAAAAACCCTTCGTCAGATTGTAAAAACTATCCGTGATATTAAGGAATCAGAT
AGTGGAGAATTTATCGCTGTAATTGCAGCCAGATCCGTACTTGACAATATCGTGGAAACAAAGAAAAAGATCGGTGGCAG
GCTTGTCACCATCAGGGAATACTCGGCAACATCTATGGAAGATGCAATTATCTCTGCTGTAAATGCCGAAAGGGACGGGG
CAAAAGCCCTGGTCTGCGCTCCTATCGTAGGTCCTACAGTGGAAAAAATCCTTAACATCCCGGTTACAACCATAGCTCCG
AAGAACAGTCTGATAGATGCTATTGAGCGCGCGCTCAAGAAAATGGAATAA

Upstream 100 bases:

>100_bases
AATGTATTAATACTTCTGGATATATTTCTCATTTAGGAATAAAAACTCCTGTAAAACGTAAATTCTCAATATTTGTCAAA
ATCTTTTACAGGATCAGAGG

Downstream 100 bases:

>100_bases
AAAGAGCGATTTTAAACAGTGCTTTTAAAAATAGAAAAGAAACCCGCGTTTTTATTTAACGCGGGAAATTTAAACTTTTT
TTTATCTGGACTTTTCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNLMNVADKVIKSAFESDEVFQKTLSAVIKEDLNLTAVDFAKKANIPPSTLYKILSGNRDPNIKTLRQIVKTIRDIKESD
SGEFIAVIAARSVLDNIVETKKKIGGRLVTIREYSATSMEDAIISAVNAERDGAKALVCAPIVGPTVEKILNIPVTTIAP
KNSLIDAIERALKKME

Sequences:

>Translated_176_residues
MNLMNVADKVIKSAFESDEVFQKTLSAVIKEDLNLTAVDFAKKANIPPSTLYKILSGNRDPNIKTLRQIVKTIRDIKESD
SGEFIAVIAARSVLDNIVETKKKIGGRLVTIREYSATSMEDAIISAVNAERDGAKALVCAPIVGPTVEKILNIPVTTIAP
KNSLIDAIERALKKME
>Mature_176_residues
MNLMNVADKVIKSAFESDEVFQKTLSAVIKEDLNLTAVDFAKKANIPPSTLYKILSGNRDPNIKTLRQIVKTIRDIKESD
SGEFIAVIAARSVLDNIVETKKKIGGRLVTIREYSATSMEDAIISAVNAERDGAKALVCAPIVGPTVEKILNIPVTTIAP
KNSLIDAIERALKKME

Specific function: Unknown

COG id: COG4800

COG function: function code K; Predicted transcriptional regulator with an HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR016472 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 19195; Mature: 19195

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLMNVADKVIKSAFESDEVFQKTLSAVIKEDLNLTAVDFAKKANIPPSTLYKILSGNRD
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCC
PNIKTLRQIVKTIRDIKESDSGEFIAVIAARSVLDNIVETKKKIGGRLVTIREYSATSME
CCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHH
DAIISAVNAERDGAKALVCAPIVGPTVEKILNIPVTTIAPKNSLIDAIERALKKME
HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLMNVADKVIKSAFESDEVFQKTLSAVIKEDLNLTAVDFAKKANIPPSTLYKILSGNRD
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCC
PNIKTLRQIVKTIRDIKESDSGEFIAVIAARSVLDNIVETKKKIGGRLVTIREYSATSME
CCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHH
DAIISAVNAERDGAKALVCAPIVGPTVEKILNIPVTTIAPKNSLIDAIERALKKME
HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]