| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227452
Identifier: 21227452
GI number: 21227452
Start: 1618055
End: 1618285
Strand: Direct
Name: 21227452
Synonym: MM_1350
Alternate gene names: NA
Gene position: 1618055-1618285 (Clockwise)
Preceding gene: 21227451
Following gene: 21227454
Centisome position: 39.5
GC content: 40.26
Gene sequence:
>231_bases ATGAAGTCTCTGATTGGATATAAGTCTCCACTCGGATATAAATCTCCACTCGGATATAAGTCTCAGCTTTACGGTATAAG GGCAGAACAGATTTTGCTTGAGCCTTTAAATTCCAGAAGGCATATGATTTTTTTTCTGCATCTGGAACCGGAGAATAAAA CTTTTAAATATGCGATACCGGGAGGTGCACCTGCTCACCTTCTCGAATTCAATTACGCAAAATCCTCCTGA
Upstream 100 bases:
>100_bases TATAAGAAAAGGCATTGAGTACCCAGATGCGGGAATTTACACAATTTATATTATTTTTTTCTTTTTCCTTTTTTACTGAA TAATAGTATTTTTTGCCGTG
Downstream 100 bases:
>100_bases AAACATAAGAGACCGAATTTTTCAGAATATGGGATCGAATTATACAGAAGAACATTTTTTCTATCAAATACAATGTTTAT GCTCCAGCAGGAGCTCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKSLIGYKSPLGYKSPLGYKSQLYGIRAEQILLEPLNSRRHMIFFLHLEPENKTFKYAIPGGAPAHLLEFNYAKSS
Sequences:
>Translated_76_residues MKSLIGYKSPLGYKSPLGYKSQLYGIRAEQILLEPLNSRRHMIFFLHLEPENKTFKYAIPGGAPAHLLEFNYAKSS >Mature_76_residues MKSLIGYKSPLGYKSPLGYKSQLYGIRAEQILLEPLNSRRHMIFFLHLEPENKTFKYAIPGGAPAHLLEFNYAKSS
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8671; Mature: 8671
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLIGYKSPLGYKSPLGYKSQLYGIRAEQILLEPLNSRRHMIFFLHLEPENKTFKYAIP CCCCCCCCCCCCCCCCCCCCCEEECCCHHHEEECCCCCCCEEEEEEEECCCCCEEEEECC GGAPAHLLEFNYAKSS CCCCEEEEEEEECCCC >Mature Secondary Structure MKSLIGYKSPLGYKSPLGYKSQLYGIRAEQILLEPLNSRRHMIFFLHLEPENKTFKYAIP CCCCCCCCCCCCCCCCCCCCCEEECCCHHHEEECCCCCCCEEEEEEEECCCCCEEEEECC GGAPAHLLEFNYAKSS CCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA