| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227454
Identifier: 21227454
GI number: 21227454
Start: 1620523
End: 1621563
Strand: Direct
Name: 21227454
Synonym: MM_1352
Alternate gene names: NA
Gene position: 1620523-1621563 (Clockwise)
Preceding gene: 21227452
Following gene: 21227455
Centisome position: 39.56
GC content: 43.04
Gene sequence:
>1041_bases ATGCAGGAGATCATTTTTATCGATGGAGGCAGTCTCCCAACACCTGAAGGTTTTACGAGGGAATGGGTGAAAGCTGCAGC CGAGAGCCGAACTGAGGACCAAAAACTCTTTTCTCTGGTAAGTGACGCTTTTCAGAGAAAAATAGACGCTGGAGTTCATG TTCCCACTTATCCGCAGTTTAGAGATATGATAGGACAGTTTCTTGACATTATCAGAGATGAGAAAAACTGTTATGAGCCC TACGTCTTAAAAGAAGAGAACGCAAAAATCCTTGAGCTGGAGATAATTGATGAGGTTGCAAAACAGTACAGAGAAAGGAC AGGCAAGACTCTGGAGGTTAGAGTTTGTGTTGCCGGTCCAACTGACCTTTACCTTCAGGCTTTCGGGGCAACGGCTTTCT CAGATGCATACCATATCATGGCTCTGAATATTGAGAACTTCATAAAGCAGGCGTTTAAAGCTGCGAAAAACTTCAAAATT AAGGTTATCGCCCTGGATGAACCAAGCCTTGGAATGAACGATAAAATTCAGTTTTCTGACTTAGATATTGTTTCTGCCCT TACTCTGGCTTCCACTTACGCGCGGAAACAGGGGGCTGATGTGGAGATCCACCTGCACTCTCCTTTAAAGTACAAACTCA TTTGCGAGACCCCTATCAACGTTATGGGGTTTGAATACGCTGCAACTCCTTCTTATATAGACCTTATGGACAAAAAAATT CTGGAAGATTCGAATACTTATATAAGGCTCGGGGTCTCACGGACTGATATTTCAAGCCTCATAGGCATGGTTAACGAGAC CTATGGAGTTAACGCCTGGAAAGAAAAAGAATATATGCAAAAAATCGTCACGGAACTTGAAACTCCTGATATAATACAAA AAAGGCTTGAAAAAGCCTGCTCTATTCTTGGGGACCGTATAAAATACGCAAGTCCTGACTGCGGGCTAGCATTCTGGCCG GACCAGGAGCTTGCTTTCAGATTGCTTGAAAATACGGCAAAAGGCATCAATGCATTTAATGCAGAGATGAAAGACCTCTA A
Upstream 100 bases:
>100_bases TATTATTCTTTTAAAAGTTTTATTTTATTATCTGTTCCTTAAGTTTATTATTCGGAGTAATTCCAATACTTATAATACTC GATCAATCTTACATACAAAT
Downstream 100 bases:
>100_bases TAGCTCCGGAAAGTTACAATCCAGGTAAATGAACAACTCCGGAAAATGGACAATTCAGGCAAATTAACAGCCCGGGTAGA TGAATAACTCCGGAAGGGGG
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
Products: tetrahydropteroyltri-L-glutamate; L-methionine
Alternate protein names: Methionine Synthase Vitamin-B12 Independent
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MQEIIFIDGGSLPTPEGFTREWVKAAAESRTEDQKLFSLVSDAFQRKIDAGVHVPTYPQFRDMIGQFLDIIRDEKNCYEP YVLKEENAKILELEIIDEVAKQYRERTGKTLEVRVCVAGPTDLYLQAFGATAFSDAYHIMALNIENFIKQAFKAAKNFKI KVIALDEPSLGMNDKIQFSDLDIVSALTLASTYARKQGADVEIHLHSPLKYKLICETPINVMGFEYAATPSYIDLMDKKI LEDSNTYIRLGVSRTDISSLIGMVNETYGVNAWKEKEYMQKIVTELETPDIIQKRLEKACSILGDRIKYASPDCGLAFWP DQELAFRLLENTAKGINAFNAEMKDL
Sequences:
>Translated_346_residues MQEIIFIDGGSLPTPEGFTREWVKAAAESRTEDQKLFSLVSDAFQRKIDAGVHVPTYPQFRDMIGQFLDIIRDEKNCYEP YVLKEENAKILELEIIDEVAKQYRERTGKTLEVRVCVAGPTDLYLQAFGATAFSDAYHIMALNIENFIKQAFKAAKNFKI KVIALDEPSLGMNDKIQFSDLDIVSALTLASTYARKQGADVEIHLHSPLKYKLICETPINVMGFEYAATPSYIDLMDKKI LEDSNTYIRLGVSRTDISSLIGMVNETYGVNAWKEKEYMQKIVTELETPDIIQKRLEKACSILGDRIKYASPDCGLAFWP DQELAFRLLENTAKGINAFNAEMKDL >Mature_346_residues MQEIIFIDGGSLPTPEGFTREWVKAAAESRTEDQKLFSLVSDAFQRKIDAGVHVPTYPQFRDMIGQFLDIIRDEKNCYEP YVLKEENAKILELEIIDEVAKQYRERTGKTLEVRVCVAGPTDLYLQAFGATAFSDAYHIMALNIENFIKQAFKAAKNFKI KVIALDEPSLGMNDKIQFSDLDIVSALTLASTYARKQGADVEIHLHSPLKYKLICETPINVMGFEYAATPSYIDLMDKKI LEDSNTYIRLGVSRTDISSLIGMVNETYGVNAWKEKEYMQKIVTELETPDIIQKRLEKACSILGDRIKYASPDCGLAFWP DQELAFRLLENTAKGINAFNAEMKDL
Specific function: Unknown
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.14
Molecular weight: Translated: 39201; Mature: 39201
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEIIFIDGGSLPTPEGFTREWVKAAAESRTEDQKLFSLVSDAFQRKIDAGVHVPTYPQF CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RDMIGQFLDIIRDEKNCYEPYVLKEENAKILELEIIDEVAKQYRERTGKTLEVRVCVAGP HHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEEEECC TDLYLQAFGATAFSDAYHIMALNIENFIKQAFKAAKNFKIKVIALDEPSLGMNDKIQFSD HHHHHHHHCCHHHCCCEEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECC LDIVSALTLASTYARKQGADVEIHLHSPLKYKLICETPINVMGFEYAATPSYIDLMDKKI HHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHH LEDSNTYIRLGVSRTDISSLIGMVNETYGVNAWKEKEYMQKIVTELETPDIIQKRLEKAC HCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH SILGDRIKYASPDCGLAFWPDQELAFRLLENTAKGINAFNAEMKDL HHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure MQEIIFIDGGSLPTPEGFTREWVKAAAESRTEDQKLFSLVSDAFQRKIDAGVHVPTYPQF CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RDMIGQFLDIIRDEKNCYEPYVLKEENAKILELEIIDEVAKQYRERTGKTLEVRVCVAGP HHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEEEECC TDLYLQAFGATAFSDAYHIMALNIENFIKQAFKAAKNFKIKVIALDEPSLGMNDKIQFSD HHHHHHHHCCHHHCCCEEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECC LDIVSALTLASTYARKQGADVEIHLHSPLKYKLICETPINVMGFEYAATPSYIDLMDKKI HHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHH LEDSNTYIRLGVSRTDISSLIGMVNETYGVNAWKEKEYMQKIVTELETPDIIQKRLEKAC HCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH SILGDRIKYASPDCGLAFWPDQELAFRLLENTAKGINAFNAEMKDL HHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5-methyltetrahydropteroyltri-L-glutamate; L-homocysteine
Specific reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = tetrahydropteroyltri-L-glutamate + L-methionine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA