| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227451
Identifier: 21227451
GI number: 21227451
Start: 1617562
End: 1617972
Strand: Direct
Name: 21227451
Synonym: MM_1349
Alternate gene names: NA
Gene position: 1617562-1617972 (Clockwise)
Preceding gene: 21227450
Following gene: 21227452
Centisome position: 39.49
GC content: 43.07
Gene sequence:
>411_bases ATGATCACAATAAACGAAGCTTTCCGGAAATTCTTAAGCGAACAGGAAGCCTCTTTAAAGCCTGACGCCTTCCTGGATTG TGAGGATGTGATTCTTCTTTATGAAGAATTCCTTGAGCTCAATGCTGAGGACTATCTGTCAGAAGAAGACAAGGCTCTCT GTGCTACCCCGTCTGAACTCGAAAATAGAAATTACTTTGATGTTTGTAGCCCCGAACAAATCAGTTCTGAAGGGATCCAT GATTTCCTTGACGACTATGTGATTGAAGTGGGAGGAGGCAAAAAATTCGTCGGGACAGCTGCAAGGGTTCTCCAGTCCTT TTTTGAATGGGCGCTGGAAAAGGGTTACATTGAGGAGAAAGCTTTTGAGGCAAACAGAGAAATTCTTGCAAGGTATAAGA AAAGGCATTGA
Upstream 100 bases:
>100_bases GTAGCAGTAGCAGAATTTTGTATAAAGCGCCTTCTAGAAAAATATAAGATCTCGTATAACGAACTGATATTACTCTACAA ATTGCATTGCAGAGATAAAT
Downstream 100 bases:
>100_bases GTACCCAGATGCGGGAATTTACACAATTTATATTATTTTTTTCTTTTTCCTTTTTTACTGAATAATAGTATTTTTTGCCG TGATGAAGTCTCTGATTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MITINEAFRKFLSEQEASLKPDAFLDCEDVILLYEEFLELNAEDYLSEEDKALCATPSELENRNYFDVCSPEQISSEGIH DFLDDYVIEVGGGKKFVGTAARVLQSFFEWALEKGYIEEKAFEANREILARYKKRH
Sequences:
>Translated_136_residues MITINEAFRKFLSEQEASLKPDAFLDCEDVILLYEEFLELNAEDYLSEEDKALCATPSELENRNYFDVCSPEQISSEGIH DFLDDYVIEVGGGKKFVGTAARVLQSFFEWALEKGYIEEKAFEANREILARYKKRH >Mature_136_residues MITINEAFRKFLSEQEASLKPDAFLDCEDVILLYEEFLELNAEDYLSEEDKALCATPSELENRNYFDVCSPEQISSEGIH DFLDDYVIEVGGGKKFVGTAARVLQSFFEWALEKGYIEEKAFEANREILARYKKRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15734; Mature: 15734
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITINEAFRKFLSEQEASLKPDAFLDCEDVILLYEEFLELNAEDYLSEEDKALCATPSEL CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHH ENRNYFDVCSPEQISSEGIHDFLDDYVIEVGGGKKFVGTAARVLQSFFEWALEKGYIEEK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH AFEANREILARYKKRH HHHHHHHHHHHHHHCC >Mature Secondary Structure MITINEAFRKFLSEQEASLKPDAFLDCEDVILLYEEFLELNAEDYLSEEDKALCATPSEL CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHH ENRNYFDVCSPEQISSEGIHDFLDDYVIEVGGGKKFVGTAARVLQSFFEWALEKGYIEEK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH AFEANREILARYKKRH HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA