| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is porA [H]
Identifier: 21227442
GI number: 21227442
Start: 1604058
End: 1605266
Strand: Reverse
Name: porA [H]
Synonym: MM_1340
Alternate gene names: 21227442
Gene position: 1605266-1604058 (Counterclockwise)
Preceding gene: 21227443
Following gene: 21227441
Centisome position: 39.19
GC content: 48.14
Gene sequence:
>1209_bases ATGATTAATCCGGCATACAAGGGAAAAATGGTTGTTGTAGAAGGCTCCTATGCTGTGGCCCATGCTACAAAAATCTGCCG CCCAAATGTGATCTCAGCCTACCCGATTACTCCTCAGACTCATATTGTTGAAAACCTGTCTCAGTTCATGGCAGACGGAG AAGTCCCCAATTGTGAGTACATTAATGTGGAATCAGAATTCTCGGCAATCTCTGCCCTGGTAGGAGCCTCCGCAGTAGGC GCAAGAACCTATTCAGCCACCACCTCACAGGGGCTTCTGCTCATGCATGAAGTGCTTTTTAATGCTTCAGGAATGAGGCT CCCGATTATAATGACAGTGGCAAACAGGGCAGTTGGTGCTCCAATTAACATCTGGAACGACCACCAGGACTCAATTGCTC AGAGAGATACAGGCTGGCTTCAGCTCTATGTAGAAGATGTTCAGGAAGCTGCTGACACCCTTCCTCAGATCTACAAGATC GCAGAAGACAGTGACATCATGCTGCCAGGTATGGTCTGCATGGACGGTTTTATCCTGTCTCACGTCTACGAGCCTGTTGT CCTGCTTGAGCAGGAACTGACAGATAATTTCCTTCCACCTTTCCATCCCGAAAACATTCTTGACCCTGAAGATCCTCAGA CTTTCGGAGCCTTTGCAGCCCCGGATACTTATGAGGAGTTCAGGTTCCTGCAGGAACAGGCAATGCAGAAAGCTCTTCCG AAGATTGAATCTGTTGCTAAGGAGTTCGAAGAAATTTTCGGCAGGTTCCATGGAGGGCTTATTGACGGGTACCATCTCGA TGATGCTGAAATAATAATCATGTCTATGGGCTCTATTCTAGGGACTGTTAAGGATGTTGTTGACCAGTACAGGACACGGG GAGAAAAGGTCGGTGTCTTAAAGGTCAGGTCCTTCAGACCTTTCCCGGTAGAGCAGATTCGCGAGGCTATTAAGAACGCC CACGCAGTAGTTGTGCTCGACAAGAACATTTCAATTGGTACAAATGAAGGAGCCCTCTTTACCGAAACAAAGTCCTGTCT CTATAACAGCAAGATCCGCGTCCCTGTAGTGGGTTATACTGTGGGGCATGGGGGCCGTGACATTCGTGCGGAAAGCATCG CCAAGATTATTGAAGAAACCAAGAAAGTTGCAAAATCCGGAATAACGGTCGAGAGCCAGTTCCTGGATCTCAGGGAGGAG TTGCTATGA
Upstream 100 bases:
>100_bases ATGGCTTTTTTGAATATGATTATGATTACTGTAAAGGTTGCGGCGTCTGTGCAAATGAGTGCCCTGCAGACGCAATTGAA ATGGTTCTGGAGGAGAAATA
Downstream 100 bases:
>100_bases GTAAAGCTGCACCTAAAACATATCTTGCCTCCGGGCACAGCGGCTGTGCAGGATGCTGTGACGCCTTTGCCGCAAAGTTC ACACTCATGGGCGCAGGCCC
Product: pyruvate synthase subunit alpha
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MINPAYKGKMVVVEGSYAVAHATKICRPNVISAYPITPQTHIVENLSQFMADGEVPNCEYINVESEFSAISALVGASAVG ARTYSATTSQGLLLMHEVLFNASGMRLPIIMTVANRAVGAPINIWNDHQDSIAQRDTGWLQLYVEDVQEAADTLPQIYKI AEDSDIMLPGMVCMDGFILSHVYEPVVLLEQELTDNFLPPFHPENILDPEDPQTFGAFAAPDTYEEFRFLQEQAMQKALP KIESVAKEFEEIFGRFHGGLIDGYHLDDAEIIIMSMGSILGTVKDVVDQYRTRGEKVGVLKVRSFRPFPVEQIREAIKNA HAVVVLDKNISIGTNEGALFTETKSCLYNSKIRVPVVGYTVGHGGRDIRAESIAKIIEETKKVAKSGITVESQFLDLREE LL
Sequences:
>Translated_402_residues MINPAYKGKMVVVEGSYAVAHATKICRPNVISAYPITPQTHIVENLSQFMADGEVPNCEYINVESEFSAISALVGASAVG ARTYSATTSQGLLLMHEVLFNASGMRLPIIMTVANRAVGAPINIWNDHQDSIAQRDTGWLQLYVEDVQEAADTLPQIYKI AEDSDIMLPGMVCMDGFILSHVYEPVVLLEQELTDNFLPPFHPENILDPEDPQTFGAFAAPDTYEEFRFLQEQAMQKALP KIESVAKEFEEIFGRFHGGLIDGYHLDDAEIIIMSMGSILGTVKDVVDQYRTRGEKVGVLKVRSFRPFPVEQIREAIKNA HAVVVLDKNISIGTNEGALFTETKSCLYNSKIRVPVVGYTVGHGGRDIRAESIAKIIEETKKVAKSGITVESQFLDLREE LL >Mature_402_residues MINPAYKGKMVVVEGSYAVAHATKICRPNVISAYPITPQTHIVENLSQFMADGEVPNCEYINVESEFSAISALVGASAVG ARTYSATTSQGLLLMHEVLFNASGMRLPIIMTVANRAVGAPINIWNDHQDSIAQRDTGWLQLYVEDVQEAADTLPQIYKI AEDSDIMLPGMVCMDGFILSHVYEPVVLLEQELTDNFLPPFHPENILDPEDPQTFGAFAAPDTYEEFRFLQEQAMQKALP KIESVAKEFEEIFGRFHGGLIDGYHLDDAEIIIMSMGSILGTVKDVVDQYRTRGEKVGVLKVRSFRPFPVEQIREAIKNA HAVVVLDKNISIGTNEGALFTETKSCLYNSKIRVPVVGYTVGHGGRDIRAESIAKIIEETKKVAKSGITVESQFLDLREE LL
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=350, Percent_Identity=33.1428571428571, Blast_Score=155, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 44482; Mature: 44482
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINPAYKGKMVVVEGSYAVAHATKICRPNVISAYPITPQTHIVENLSQFMADGEVPNCEY CCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEE INVESEFSAISALVGASAVGARTYSATTSQGLLLMHEVLFNASGMRLPIIMTVANRAVGA EECHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHCCC PINIWNDHQDSIAQRDTGWLQLYVEDVQEAADTLPQIYKIAEDSDIMLPGMVCMDGFILS CCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HVYEPVVLLEQELTDNFLPPFHPENILDPEDPQTFGAFAAPDTYEEFRFLQEQAMQKALP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KIESVAKEFEEIFGRFHGGLIDGYHLDDAEIIIMSMGSILGTVKDVVDQYRTRGEKVGVL HHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE KVRSFRPFPVEQIREAIKNAHAVVVLDKNISIGTNEGALFTETKSCLYNSKIRVPVVGYT EECCCCCCCHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEHHHHHHHCCCEEEEEEEEE VGHGGRDIRAESIAKIIEETKKVAKSGITVESQFLDLREELL ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MINPAYKGKMVVVEGSYAVAHATKICRPNVISAYPITPQTHIVENLSQFMADGEVPNCEY CCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEE INVESEFSAISALVGASAVGARTYSATTSQGLLLMHEVLFNASGMRLPIIMTVANRAVGA EECHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHCCC PINIWNDHQDSIAQRDTGWLQLYVEDVQEAADTLPQIYKIAEDSDIMLPGMVCMDGFILS CCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HVYEPVVLLEQELTDNFLPPFHPENILDPEDPQTFGAFAAPDTYEEFRFLQEQAMQKALP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KIESVAKEFEEIFGRFHGGLIDGYHLDDAEIIIMSMGSILGTVKDVVDQYRTRGEKVGVL HHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE KVRSFRPFPVEQIREAIKNAHAVVVLDKNISIGTNEGALFTETKSCLYNSKIRVPVVGYT EECCCCCCCHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEHHHHHHHCCCEEEEEEEEE VGHGGRDIRAESIAKIIEETKKVAKSGITVESQFLDLREELL ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8620891 [H]