| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is porB [H]
Identifier: 21227441
GI number: 21227441
Start: 1603171
End: 1604061
Strand: Reverse
Name: porB [H]
Synonym: MM_1339
Alternate gene names: 21227441
Gene position: 1604061-1603171 (Counterclockwise)
Preceding gene: 21227442
Following gene: 21227440
Centisome position: 39.16
GC content: 49.05
Gene sequence:
>891_bases ATGAGTAAAGCTGCACCTAAAACATATCTTGCCTCCGGGCACAGCGGCTGTGCAGGATGCTGTGACGCCTTTGCCGCAAA GTTCACACTCATGGGCGCAGGCCCAAACTGTATTGTGGTTAACCCTACAGGCTGCCTTGAAGTAATGACCACTCCTTTCC CGAATTCTGCCTGGCAGGTTCCATGGATCCACTCCCTGTTTGAAAACGCAGGTGCAGTGGCTTCAGGTGTGGAAGCTGCC CTGATAGCCCTTGGCAAAAAGAATGATACCAAGGTCATATCAATAGGTGGCGACGGCTCTACTATGGACATAGGGATCAG GTCTCTCTCAGGCGCCTTTGAGCGCGGCCATGATTTCACCTATGTATGCATGGACAATGAAGCTTACATGAATACAGGGA TTCAGCGCAGCAGCGGAACTCCTTTCGATGCCAGTACAACGACAAGCCCTCCAGGAAAATTCTCTTTCGGAAATCCACGT CCAAAAAAGGATATGGTTGCAATTATGGCAGCCCATGGCTCTCCTTATGTTGCAACAACCTCAATCGGCTACCCGAGAGA CATGATTCGTAAAGTTAAAAAAGCCACAGAAATAGTTGGCCCGACTTATATCCACGCCCATGCTCCCTGTACTACAGGCT GGGGTTTTGATACGTCTAAGACCCTGGAAGTTGCCAAGCTTGCAGTGGAAACCTGTCTCTGGCCCATGTACGAAATGGAA AACGGAGAAATCACACAGGTCAGAAAGGTCAAAGACCCGAAGCCAGTCGAGGATTATCTGAGAGTTCAGAAGCGCTTCAA GCACCTCTTCACAATGGAAGGCGGTGAAGAAGAAATCAAGAAAATCCAGGCTATGGCAGATTGGAACATAAAACACTACG GACTTCAGTAA
Upstream 100 bases:
>100_bases GTGCGGAAAGCATCGCCAAGATTATTGAAGAAACCAAGAAAGTTGCAAAATCCGGAATAACGGTCGAGAGCCAGTTCCTG GATCTCAGGGAGGAGTTGCT
Downstream 100 bases:
>100_bases AAACTGAAGTTCTACTTTTTTGATTTATTTTATTTTCTTTCTTTTTGTTTTCTTATATTTCCTTTCAGTTTTTCTCTTCG GTTTTTAATTCTTAGATCTT
Product: pyruvate synthase subunit beta
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSKAAPKTYLASGHSGCAGCCDAFAAKFTLMGAGPNCIVVNPTGCLEVMTTPFPNSAWQVPWIHSLFENAGAVASGVEAA LIALGKKNDTKVISIGGDGSTMDIGIRSLSGAFERGHDFTYVCMDNEAYMNTGIQRSSGTPFDASTTTSPPGKFSFGNPR PKKDMVAIMAAHGSPYVATTSIGYPRDMIRKVKKATEIVGPTYIHAHAPCTTGWGFDTSKTLEVAKLAVETCLWPMYEME NGEITQVRKVKDPKPVEDYLRVQKRFKHLFTMEGGEEEIKKIQAMADWNIKHYGLQ
Sequences:
>Translated_296_residues MSKAAPKTYLASGHSGCAGCCDAFAAKFTLMGAGPNCIVVNPTGCLEVMTTPFPNSAWQVPWIHSLFENAGAVASGVEAA LIALGKKNDTKVISIGGDGSTMDIGIRSLSGAFERGHDFTYVCMDNEAYMNTGIQRSSGTPFDASTTTSPPGKFSFGNPR PKKDMVAIMAAHGSPYVATTSIGYPRDMIRKVKKATEIVGPTYIHAHAPCTTGWGFDTSKTLEVAKLAVETCLWPMYEME NGEITQVRKVKDPKPVEDYLRVQKRFKHLFTMEGGEEEIKKIQAMADWNIKHYGLQ >Mature_295_residues SKAAPKTYLASGHSGCAGCCDAFAAKFTLMGAGPNCIVVNPTGCLEVMTTPFPNSAWQVPWIHSLFENAGAVASGVEAAL IALGKKNDTKVISIGGDGSTMDIGIRSLSGAFERGHDFTYVCMDNEAYMNTGIQRSSGTPFDASTTTSPPGKFSFGNPRP KKDMVAIMAAHGSPYVATTSIGYPRDMIRKVKKATEIVGPTYIHAHAPCTTGWGFDTSKTLEVAKLAVETCLWPMYEMEN GEITQVRKVKDPKPVEDYLRVQKRFKHLFTMEGGEEEIKKIQAMADWNIKHYGLQ
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=187, Percent_Identity=27.807486631016, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 32089; Mature: 31958
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAAPKTYLASGHSGCAGCCDAFAAKFTLMGAGPNCIVVNPTGCLEVMTTPFPNSAWQV CCCCCCCHHHHCCCCCHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEEECCCCCCCCCC PWIHSLFENAGAVASGVEAALIALGKKNDTKVISIGGDGSTMDIGIRSLSGAFERGHDFT HHHHHHHHCCCHHHHHHHEEEHEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCEE YVCMDNEAYMNTGIQRSSGTPFDASTTTSPPGKFSFGNPRPKKDMVAIMAAHGSPYVATT EEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCEEEEE SIGYPRDMIRKVKKATEIVGPTYIHAHAPCTTGWGFDTSKTLEVAKLAVETCLWPMYEME CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECC NGEITQVRKVKDPKPVEDYLRVQKRFKHLFTMEGGEEEIKKIQAMADWNIKHYGLQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCC >Mature Secondary Structure SKAAPKTYLASGHSGCAGCCDAFAAKFTLMGAGPNCIVVNPTGCLEVMTTPFPNSAWQV CCCCCCHHHHCCCCCHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEEECCCCCCCCCC PWIHSLFENAGAVASGVEAALIALGKKNDTKVISIGGDGSTMDIGIRSLSGAFERGHDFT HHHHHHHHCCCHHHHHHHEEEHEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCEE YVCMDNEAYMNTGIQRSSGTPFDASTTTSPPGKFSFGNPRPKKDMVAIMAAHGSPYVATT EEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCEEEEE SIGYPRDMIRKVKKATEIVGPTYIHAHAPCTTGWGFDTSKTLEVAKLAVETCLWPMYEME CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECC NGEITQVRKVKDPKPVEDYLRVQKRFKHLFTMEGGEEEIKKIQAMADWNIKHYGLQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8620891 [H]