| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is gntP [H]
Identifier: 21227433
GI number: 21227433
Start: 1588402
End: 1589739
Strand: Direct
Name: gntP [H]
Synonym: MM_1331
Alternate gene names: 21227433
Gene position: 1588402-1589739 (Clockwise)
Preceding gene: 21227432
Following gene: 21227434
Centisome position: 38.78
GC content: 44.39
Gene sequence:
>1338_bases ATGCATCCTGTCCTCATTTTCCTTTTCGCACTTATAGCCATACTGCTTTTTACGGCAAAATTCAGGCTTCACCCTTTCCT TAGTCTTGTTCTTGTATCTCTTCTAACAGGGATTCTTGCAGGAGAGCCCATACGCACTATCGAAGCAGTTACTGAAGGAC TGGGAAGCGTTTTTTCCCGTTTTGCCATTATTATTACGAGTGGGAGCATCATCGGACTTCTGCTCCAGAAAACCGGGGGA ATGTCTTTAATAGCTTCTGACATTACGCGCTTTTTCAAAAATCCCCTGCTTGCCCTGAGCTTTCTTGGATTTCTTTTTTC CGTGCCAACAATGTGCTATATCCTTGCTTACGTTATCTTTATCCCGATAGCAAAAGAACTGTCTTCCAGGTTCAATTACC CCCCGATTTCCACTGCAACTGCACTTGCATTGGGAGCCGTTGCTTCATTTAATCTGGTTTATCCTTCCCCTGTGATCATT TCGGCAGCAGAAGAACTTTCAGCAAACAGGGATATGCTTATTCTACTGGGATTTCTTACCGCTGTTCCCACTTCTTTTTC AGGATATCTTTATGCGAGGAGTCTTGGAAAGGCTGAAGTTTCCGGAATGAATGAGGGTGGGGTAATACGGGAAAAAACCA TTGTAAAGGAGAAAAAAGACCTGTCACAGGAAAATGGTGCGTTGCAAAGGACAGAAAATAGAAAACCAGGAAGGTTTGAA GCTTATGCTCCGATTTTTATTCCTCTATTTCTCATCCTTTTCGAGGCTGTATTAAATAATCCTAATACTCTATTCACCTT TCTGGGAAATCCGAATGTTGCATTACTTATTGGGGTCCTTCTTTCTATTTTTTCCGGGAGAGTGCTGGGACTTCCAATGA TAAGGGTCCAGGTCGAAAAAGCCATAAAAAGAAGCGGTGTTGTCCTGCTCGACCTTTGTGGGGGTGGAGCTCTTGGTGCA ACTCTTGCCATGACAGGAGCAGGGGAAGCCCTTGGAAAGTTTTTCCTGCAGTTCAACCTGCCTCATATTCTTGTGCCTTT TCTTGTTGCAGCAGCCCTCCAAACAGTGCAGGGCTCAAGAGTTGTAACGATGCTCGTCGCTCCGTCCCTTTTACTCCCCC TTGTCCCTGAGCTTGGACTCCCTCCGGAAATTTTGATCCTTTCAATGGCTTCAGGCACTTTTATGATTTCACACGTTAAT GACCCGTTTTTCTGGATTTTCGGAGAACTCGCAGAACTGACACCCTCTGAGGTTTTCAGGTCAAATACACTTGGAAACGC CCTTATGGGAGTAGTAAGCTTTCTGATCGTCTCCGGAATATATTTTTTCTTTTACTGA
Upstream 100 bases:
>100_bases GGAATCTCCGGAGGAGAACACTTAAGAGTCTATAAGTAAGATATACCGGGATTCATTTCCCATTATCAGCAATTTATAAT TCCATAAGAGCCGGAATATG
Downstream 100 bases:
>100_bases TATTTTTTAAAGAATTTTATATCTTATTTGTAGTATTAGATATTTTTTAATAATTAATTTTTATGCTATGTGTTTTCTTT TACATTATATTTTCATTTAT
Product: gluconate permease
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MHPVLIFLFALIAILLFTAKFRLHPFLSLVLVSLLTGILAGEPIRTIEAVTEGLGSVFSRFAIIITSGSIIGLLLQKTGG MSLIASDITRFFKNPLLALSFLGFLFSVPTMCYILAYVIFIPIAKELSSRFNYPPISTATALALGAVASFNLVYPSPVII SAAEELSANRDMLILLGFLTAVPTSFSGYLYARSLGKAEVSGMNEGGVIREKTIVKEKKDLSQENGALQRTENRKPGRFE AYAPIFIPLFLILFEAVLNNPNTLFTFLGNPNVALLIGVLLSIFSGRVLGLPMIRVQVEKAIKRSGVVLLDLCGGGALGA TLAMTGAGEALGKFFLQFNLPHILVPFLVAAALQTVQGSRVVTMLVAPSLLLPLVPELGLPPEILILSMASGTFMISHVN DPFFWIFGELAELTPSEVFRSNTLGNALMGVVSFLIVSGIYFFFY
Sequences:
>Translated_445_residues MHPVLIFLFALIAILLFTAKFRLHPFLSLVLVSLLTGILAGEPIRTIEAVTEGLGSVFSRFAIIITSGSIIGLLLQKTGG MSLIASDITRFFKNPLLALSFLGFLFSVPTMCYILAYVIFIPIAKELSSRFNYPPISTATALALGAVASFNLVYPSPVII SAAEELSANRDMLILLGFLTAVPTSFSGYLYARSLGKAEVSGMNEGGVIREKTIVKEKKDLSQENGALQRTENRKPGRFE AYAPIFIPLFLILFEAVLNNPNTLFTFLGNPNVALLIGVLLSIFSGRVLGLPMIRVQVEKAIKRSGVVLLDLCGGGALGA TLAMTGAGEALGKFFLQFNLPHILVPFLVAAALQTVQGSRVVTMLVAPSLLLPLVPELGLPPEILILSMASGTFMISHVN DPFFWIFGELAELTPSEVFRSNTLGNALMGVVSFLIVSGIYFFFY >Mature_445_residues MHPVLIFLFALIAILLFTAKFRLHPFLSLVLVSLLTGILAGEPIRTIEAVTEGLGSVFSRFAIIITSGSIIGLLLQKTGG MSLIASDITRFFKNPLLALSFLGFLFSVPTMCYILAYVIFIPIAKELSSRFNYPPISTATALALGAVASFNLVYPSPVII SAAEELSANRDMLILLGFLTAVPTSFSGYLYARSLGKAEVSGMNEGGVIREKTIVKEKKDLSQENGALQRTENRKPGRFE AYAPIFIPLFLILFEAVLNNPNTLFTFLGNPNVALLIGVLLSIFSGRVLGLPMIRVQVEKAIKRSGVVLLDLCGGGALGA TLAMTGAGEALGKFFLQFNLPHILVPFLVAAALQTVQGSRVVTMLVAPSLLLPLVPELGLPPEILILSMASGTFMISHVN DPFFWIFGELAELTPSEVFRSNTLGNALMGVVSFLIVSGIYFFFY
Specific function: Part Of The Gluconate Utilization System Gnt-I; Low- Affinity Intake Of Gluconate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=432, Percent_Identity=26.3888888888889, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI48994939, Length=457, Percent_Identity=25.382932166302, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI1790716, Length=445, Percent_Identity=25.6179775280899, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788707, Length=446, Percent_Identity=25.5605381165919, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1789097, Length=455, Percent_Identity=26.8131868131868, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1790776, Length=464, Percent_Identity=22.8448275862069, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI2367370, Length=431, Percent_Identity=23.6658932714617, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 48004; Mature: 48004
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVLIFLFALIAILLFTAKFRLHPFLSLVLVSLLTGILAGEPIRTIEAVTEGLGSVFSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAIIITSGSIIGLLLQKTGGMSLIASDITRFFKNPLLALSFLGFLFSVPTMCYILAYVIF HHHEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH IPIAKELSSRFNYPPISTATALALGAVASFNLVYPSPVIISAAEELSANRDMLILLGFLT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEECCCCCEEECHHHHCCCCCHHHHHHHHH AVPTSFSGYLYARSLGKAEVSGMNEGGVIREKTIVKEKKDLSQENGALQRTENRKPGRFE HCCCCCCCHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AYAPIFIPLFLILFEAVLNNPNTLFTFLGNPNVALLIGVLLSIFSGRVLGLPMIRVQVEK CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH AIKRSGVVLLDLCGGGALGATLAMTGAGEALGKFFLQFNLPHILVPFLVAAALQTVQGSR HHHHCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH VVTMLVAPSLLLPLVPELGLPPEILILSMASGTFMISHVNDPFFWIFGELAELTPSEVFR HHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCEEEEEECCCCHHHHHHHHHHCCHHHHHH SNTLGNALMGVVSFLIVSGIYFFFY HCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPVLIFLFALIAILLFTAKFRLHPFLSLVLVSLLTGILAGEPIRTIEAVTEGLGSVFSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAIIITSGSIIGLLLQKTGGMSLIASDITRFFKNPLLALSFLGFLFSVPTMCYILAYVIF HHHEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH IPIAKELSSRFNYPPISTATALALGAVASFNLVYPSPVIISAAEELSANRDMLILLGFLT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEECCCCCEEECHHHHCCCCCHHHHHHHHH AVPTSFSGYLYARSLGKAEVSGMNEGGVIREKTIVKEKKDLSQENGALQRTENRKPGRFE HCCCCCCCHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AYAPIFIPLFLILFEAVLNNPNTLFTFLGNPNVALLIGVLLSIFSGRVLGLPMIRVQVEK CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH AIKRSGVVLLDLCGGGALGATLAMTGAGEALGKFFLQFNLPHILVPFLVAAALQTVQGSR HHHHCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH VVTMLVAPSLLLPLVPELGLPPEILILSMASGTFMISHVNDPFFWIFGELAELTPSEVFR HHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCEEEEEECCCCHHHHHHHHHHCCHHHHHH SNTLGNALMGVVSFLIVSGIYFFFY HCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA