| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mntR [C]
Identifier: 21227434
GI number: 21227434
Start: 1590040
End: 1590489
Strand: Direct
Name: mntR [C]
Synonym: MM_1332
Alternate gene names: 21227434
Gene position: 1590040-1590489 (Clockwise)
Preceding gene: 21227433
Following gene: 21227435
Centisome position: 38.82
GC content: 42.89
Gene sequence:
>450_bases ATGAATGAGCAGAATTATCCAGAGTTTACAGGCCTTGAGCTCTCTCCAAGGAAGGTAGATTACCTCAAATTTATTTTTGA AAAAAGAGGCACTGTAAAGACTACAGAAATTTCCTCCTGCCTGCAGGTCGACCCTTCAACAACAAGCAAAACTTTAAATG AACTTGCAACTGCTGGCTATCTGAACCATGTTCCATACAGGGGTGTGGACCTGACTGACATGGGAAAGGCATATGCAGAA TTTCTTGTTCGGAGGCACAGGATTTTGAGCCTTCTCTTTACTCATTACGGTCTTTCTACAGAGGAAGCATGTGCTGAAGT TTCTCGTTTTGAAGCTTTTGTTTCCAGGAATTCGGTAAACAAAATTTGCAGTTCAATGGGCCATCCGATGGTTGGCGTCT GCGGAGAAATAAGCCACGAGAAATGTTTTCCTGAGGAGCATCACCATTAA
Upstream 100 bases:
>100_bases CGGAGTCCGTGGATTCTCTCAAATTTTGATATAGTAAAAGTTTTAGCTTTTAATTTGGTGTATGATAAACAATAAATACC AGTTTTTTATATTTCTCTAT
Downstream 100 bases:
>100_bases TGATTCCCAGTCTGGATCAGATCTGGATGACGACTTTTACCCGGTCCTGATATAAGTTTGGTGTTATGCCAAAATATGCC TCGAATTAATCAAATTTTTG
Product: Iron-dependent repressor
Products: NA
Alternate protein names: Iron Dependent Repressor DtxR Family; Metal Dependent Transcriptional Regulator; Mn-Dependent Transcriptional Regulator; DtxR Family Iron Dependent Repressor; Fe-Dependent Transcription Repressor; DtxR Family Transcriptional Regulator; Iron-Dependent Repressor; Manganese-Dependent Repressor MntR; Metal(Iron)-Dependent Transcriptional Regulator; Metal-Dependent Transcriptional Regulator
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNEQNYPEFTGLELSPRKVDYLKFIFEKRGTVKTTEISSCLQVDPSTTSKTLNELATAGYLNHVPYRGVDLTDMGKAYAE FLVRRHRILSLLFTHYGLSTEEACAEVSRFEAFVSRNSVNKICSSMGHPMVGVCGEISHEKCFPEEHHH
Sequences:
>Translated_149_residues MNEQNYPEFTGLELSPRKVDYLKFIFEKRGTVKTTEISSCLQVDPSTTSKTLNELATAGYLNHVPYRGVDLTDMGKAYAE FLVRRHRILSLLFTHYGLSTEEACAEVSRFEAFVSRNSVNKICSSMGHPMVGVCGEISHEKCFPEEHHH >Mature_149_residues MNEQNYPEFTGLELSPRKVDYLKFIFEKRGTVKTTEISSCLQVDPSTTSKTLNELATAGYLNHVPYRGVDLTDMGKAYAE FLVRRHRILSLLFTHYGLSTEEACAEVSRFEAFVSRNSVNKICSSMGHPMVGVCGEISHEKCFPEEHHH
Specific function: In the presence of manganese, it represses the manganese transporter mnth [C]
COG id: COG1321
COG function: function code K; Mn-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16890; Mature: 16890
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50944 HTH_DTXR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQNYPEFTGLELSPRKVDYLKFIFEKRGTVKTTEISSCLQVDPSTTSKTLNELATAGY CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH LNHVPYRGVDLTDMGKAYAEFLVRRHRILSLLFTHYGLSTEEACAEVSRFEAFVSRNSVN HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KICSSMGHPMVGVCGEISHEKCFPEEHHH HHHHHHCCCHHHHHCCCCHHHCCCCCCCC >Mature Secondary Structure MNEQNYPEFTGLELSPRKVDYLKFIFEKRGTVKTTEISSCLQVDPSTTSKTLNELATAGY CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH LNHVPYRGVDLTDMGKAYAEFLVRRHRILSLLFTHYGLSTEEACAEVSRFEAFVSRNSVN HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KICSSMGHPMVGVCGEISHEKCFPEEHHH HHHHHHCCCHHHHHCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA