| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is cheA [H]
Identifier: 21227427
GI number: 21227427
Start: 1579268
End: 1581283
Strand: Reverse
Name: cheA [H]
Synonym: MM_1325
Alternate gene names: 21227427
Gene position: 1581283-1579268 (Counterclockwise)
Preceding gene: 21227428
Following gene: 21227426
Centisome position: 38.6
GC content: 39.04
Gene sequence:
>2016_bases ATGGACATGTCGAAGTATATAGGCATTTTCAGGTCCGAATCTGAAAAAAACATTCAGGAGATGAGCGACTCCCTGCTAGC ACTTGAACAGAATCCTGAAAATGCGGAGCAGATGAATATATTATTTCGTTCAGCTCATACTTTTAAGGGCATGGCTGCAA CCATGGGGTTCAAACAGATTGTTGAACTGACACATGAGATGGAAAGCCTGATTGATAGATCCCGTACAGGAAAGCTAACC CTTGATTCTTATTTAATCGATATCCTTTTCGAATGCCTGGATACTCTGGAGAGGCTTGTTGAGGAAGTCTGTGCAGGCAT GGAAAACAAAATCGTCGGGAGAGAAGGCGATAGAAGCGAAGGTAGTAACTCCGGCCCAGATGCAGAAAAGATTTTAGAAA CTCTGAGGACGATAAATAATCCCTCAGAGGAATACATTCTTCAAAAAAATGAATTTTGTACTTTTTCTTTAGATAAAGGA ATAGAGGAAAAAGGGAAAAGACAAGAAGTAAAGGAAAAAACAGGAGAGAAAACGGAAGAGAAAGCGGAAGAGAAAGAAAA AGGAGAAAAAGAAGAAGAAACAGAAAAAACAGAAGGAAGAGAAAAAGAAGAAACACAAAAAACAAAAGAGGGAGAAAAAA TAGAAGAGAGAGAAAAAGGAGAAAAAATAGAAGAGAGAGAAAAAGGAGAAAAAATAGAAGAGAGAGAAAAAGGAGAAAAA ACAGAAGAAGATGAGGAAAGAGAAAGAAAAAATGCAGAAAAAGAGGAAAAGGAAAAAGCGGTAGAGAAAGAAAAAGAAGA AGAAACAGAAGGGAGAGAAAAAAACGAAAAAGAAAGGCAAAGTGGTAAGGAAGTAAAAACCCAGAGCCCAAAAATACATA GTTCAAGGGTCAGTACTGAGAAGTTAGATAAGCTGATGAACCTTGTCGGTGAGCTAGTAATAAACAGAAGCAGGGTAAAA GAGCTCACAGGGAAATTAAAATCAAAAGATCTGGACTTTGCACTTTCTGACTACCAGAAGCTAACCAGGGAGCTTCAAGA AGAAGTGTTAGAGATAAGGATGATACCTCTGGACCACATAACCAATATTTTCCCCAGAATGATAAGAGATCTTGCGAGGG GACAAAATAAAAAAATTGATTTCATAATAAGGGGAAAAGAAATCAAAATAGATAGAGCTATTATAGAAGAAATCGGGGAT CCTCTTGTGCACCTGCTAAGAAATGCAGTGGACCACGGAATAGAAACTCCTGAAAAGCGTGTGGAACTCGGGAAAGAGGA AACTGGCAAGATAATAATTACAGCTTCAAGACAGCAAAACTATGTCCTTATCAGGATAGAGGATGATGGGAAAGGCATAG ATGCAGAAGAAATCCGAAAAATCGCATTTCAAAGAAGACTTATTTCTAGAGACGAAGCCGAACAGCTTTCTGAAAGAGAA TTAATACAGCTAATTTTCACACCAGGACTCAGTACTGCCAGCGAGGTTACGGACCTTTCAGGCAGAGGAGTCGGGATGGA TATTGTAAAAAACCGAATTGAACACCTTGGAGGTTCCATAAAGGTGGACTCAAAACCTGGAACCGGTTCAAGGTTCGAAT TGAGGTTACCAATAACTATTGCTCTTTGCCAGTCTATGCTTGTAAAAGTGGGAATGGAAAGGTACGCAATACCTTTTACC AATATAATAAAAAGCATTTCAGTCAGGAAAAAGGACGTCCGGCATATAAGGAGCGAAGAAGTTATTTTGATAAATGAAAA AACACTTCCACTGTTGAGATTACGTAAGTTGTTCCAATTGCCTGCGATAGAGAATGAAGAAAACCTGGATATAGTTATAG TCGAAAAAGCCGGACAGTACATAGGGCTTGTGGTGGACTCACTGCTTGGAAAACAGGAAATAATTATAAAAACCTTCAAA AGCAGGTTGCTGGAAAAAACCCGGGGATTTGCGGGAGCAACCGTCATGGGAGACGGGAGTGTTATTTTAATCCTTGATAT TAACTCTATAACCTGA
Upstream 100 bases:
>100_bases TAACATAATTCTTAAAAGTAACATAATTAATAATTTTTACTTATAGAAAATTCCGGTAGCTTTCAGGATTATAAAATGTT TACAGAAGGCAGGCAAAATC
Downstream 100 bases:
>100_bases AATCTCGACTGAAGAGAAAAATGAACGCATGCAGGTGAAACGAAAGTGAATGAAACCGGATAAATATAGACTGGAGACAG ACGCAGAGAAAATAAAAACA
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQIVELTHEMESLIDRSRTGKLT LDSYLIDILFECLDTLERLVEEVCAGMENKIVGREGDRSEGSNSGPDAEKILETLRTINNPSEEYILQKNEFCTFSLDKG IEEKGKRQEVKEKTGEKTEEKAEEKEKGEKEEETEKTEGREKEETQKTKEGEKIEEREKGEKIEEREKGEKIEEREKGEK TEEDEERERKNAEKEEKEKAVEKEKEEETEGREKNEKERQSGKEVKTQSPKIHSSRVSTEKLDKLMNLVGELVINRSRVK ELTGKLKSKDLDFALSDYQKLTRELQEEVLEIRMIPLDHITNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIGD PLVHLLRNAVDHGIETPEKRVELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEIRKIAFQRRLISRDEAEQLSERE LIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGGSIKVDSKPGTGSRFELRLPITIALCQSMLVKVGMERYAIPFT NIIKSISVRKKDVRHIRSEEVILINEKTLPLLRLRKLFQLPAIENEENLDIVIVEKAGQYIGLVVDSLLGKQEIIIKTFK SRLLEKTRGFAGATVMGDGSVILILDINSIT
Sequences:
>Translated_671_residues MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQIVELTHEMESLIDRSRTGKLT LDSYLIDILFECLDTLERLVEEVCAGMENKIVGREGDRSEGSNSGPDAEKILETLRTINNPSEEYILQKNEFCTFSLDKG IEEKGKRQEVKEKTGEKTEEKAEEKEKGEKEEETEKTEGREKEETQKTKEGEKIEEREKGEKIEEREKGEKIEEREKGEK TEEDEERERKNAEKEEKEKAVEKEKEEETEGREKNEKERQSGKEVKTQSPKIHSSRVSTEKLDKLMNLVGELVINRSRVK ELTGKLKSKDLDFALSDYQKLTRELQEEVLEIRMIPLDHITNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIGD PLVHLLRNAVDHGIETPEKRVELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEIRKIAFQRRLISRDEAEQLSERE LIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGGSIKVDSKPGTGSRFELRLPITIALCQSMLVKVGMERYAIPFT NIIKSISVRKKDVRHIRSEEVILINEKTLPLLRLRKLFQLPAIENEENLDIVIVEKAGQYIGLVVDSLLGKQEIIIKTFK SRLLEKTRGFAGATVMGDGSVILILDINSIT >Mature_671_residues MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQIVELTHEMESLIDRSRTGKLT LDSYLIDILFECLDTLERLVEEVCAGMENKIVGREGDRSEGSNSGPDAEKILETLRTINNPSEEYILQKNEFCTFSLDKG IEEKGKRQEVKEKTGEKTEEKAEEKEKGEKEEETEKTEGREKEETQKTKEGEKIEEREKGEKIEEREKGEKIEEREKGEK TEEDEERERKNAEKEEKEKAVEKEKEEETEGREKNEKERQSGKEVKTQSPKIHSSRVSTEKLDKLMNLVGELVINRSRVK ELTGKLKSKDLDFALSDYQKLTRELQEEVLEIRMIPLDHITNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIGD PLVHLLRNAVDHGIETPEKRVELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEIRKIAFQRRLISRDEAEQLSERE LIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGGSIKVDSKPGTGSRFELRLPITIALCQSMLVKVGMERYAIPFT NIIKSISVRKKDVRHIRSEEVILINEKTLPLLRLRKLFQLPAIENEENLDIVIVEKAGQYIGLVVDSLLGKQEIIIKTFK SRLLEKTRGFAGATVMGDGSVILILDINSIT
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Membrane (Potential). Note=It is not known whether CheA is actually membrane bound although CheA has two regions at the C-terminal end with the potential to be transmembrane regions [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=696, Percent_Identity=31.7528735632184, Blast_Score=335, Evalue=5e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 76794; Mature: 76794
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQI CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VELTHEMESLIDRSRTGKLTLDSYLIDILFECLDTLERLVEEVCAGMENKIVGREGDRSE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC GSNSGPDAEKILETLRTINNPSEEYILQKNEFCTFSLDKGIEEKGKRQEVKEKTGEKTEE CCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHH KAEEKEKGEKEEETEKTEGREKEETQKTKEGEKIEEREKGEKIEEREKGEKIEEREKGEK HHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHCCHHHHHHCCCC TEEDEERERKNAEKEEKEKAVEKEKEEETEGREKNEKERQSGKEVKTQSPKIHSSRVSTE CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHCCHHHHHCCCHHHCCCCCCHHHHCCHH KLDKLMNLVGELVINRSRVKELTGKLKSKDLDFALSDYQKLTRELQEEVLEIRMIPLDHI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH TNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIGDPLVHLLRNAVDHGIETPEKR HHHHHHHHHHHHCCCCCCEEEEEECCEEEHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHH VELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEIRKIAFQRRLISRDEAEQLSERE HHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGGSIKVDSKPGTGSRFELRLPITI HHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCHHH ALCQSMLVKVGMERYAIPFTNIIKSISVRKKDVRHIRSEEVILINEKTLPLLRLRKLFQL HHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHC PAIENEENLDIVIVEKAGQYIGLVVDSLLGKQEIIIKTFKSRLLEKTRGFAGATVMGDGS CCCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC VILILDINSIT EEEEEECCCCC >Mature Secondary Structure MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQI CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VELTHEMESLIDRSRTGKLTLDSYLIDILFECLDTLERLVEEVCAGMENKIVGREGDRSE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC GSNSGPDAEKILETLRTINNPSEEYILQKNEFCTFSLDKGIEEKGKRQEVKEKTGEKTEE CCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHH KAEEKEKGEKEEETEKTEGREKEETQKTKEGEKIEEREKGEKIEEREKGEKIEEREKGEK HHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHCCHHHHHHCCCC TEEDEERERKNAEKEEKEKAVEKEKEEETEGREKNEKERQSGKEVKTQSPKIHSSRVSTE CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHCCHHHHHCCCHHHCCCCCCHHHHCCHH KLDKLMNLVGELVINRSRVKELTGKLKSKDLDFALSDYQKLTRELQEEVLEIRMIPLDHI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH TNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIGDPLVHLLRNAVDHGIETPEKR HHHHHHHHHHHHCCCCCCEEEEEECCEEEHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHH VELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEIRKIAFQRRLISRDEAEQLSERE HHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGGSIKVDSKPGTGSRFELRLPITI HHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCHHH ALCQSMLVKVGMERYAIPFTNIIKSISVRKKDVRHIRSEEVILINEKTLPLLRLRKLFQL HHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHC PAIENEENLDIVIVEKAGQYIGLVVDSLLGKQEIIIKTFKSRLLEKTRGFAGATVMGDGS CCCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC VILILDINSIT EEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1938941; 9384377 [H]