| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227404
Identifier: 21227404
GI number: 21227404
Start: 1549630
End: 1550424
Strand: Direct
Name: 21227404
Synonym: MM_1302
Alternate gene names: NA
Gene position: 1549630-1550424 (Clockwise)
Preceding gene: 21227403
Following gene: 21227405
Centisome position: 37.83
GC content: 42.01
Gene sequence:
>795_bases ATGAATGTCAGCGAGATTATGACAGAAGAGCCCGTAAGTATCAAAGAAGGGGATTTTGTAACTCACGCCCGCCAGCTGAT GCGTGATTACTTCTTTCGGGGTATTGTTGTCGTGGATGAGGGAAACAGGCTCGTAGGAATGTTAAACGACCAGGACATCA TGAATGTTACATCCACACGTTCAAATGTGACAGTGAGCGGATATGCGAGGCAGTCTCCTACCATCACTCCGGACATGGAT CTCGTAAAAGCTGCAAAATTAATGGTACAATCGAAACAGAACAGAGTTCCGGTTGTCAAATCAACAACAGACCGCACGGT TGTTGGAATTCTCAGTGATGTGGATATTCTCAGAAATGTGGAACTCCCCAGAAATATTTCGAAAACCATAGAAGCTATCA TGACAAAAAAAGTCAAGACCTGTTCTCCAGATGAAAGGGTATCAAAAGTCTGGAATTATATGATAGAAACGGATTATACC GGCATTCCGGTAGTTTCAAAGAAAGGGGATCCCATTGGGATGATAACAAGAAGGGACATAATTAAGTCAGGCGCTTTAAG AATGGCTATAGAAGACGAGCGGGCAACAAGACCGAACGAAAGTCCCAAAGTTGAGAAGATTATGTCAACTCCTGCTTATA CTTTATCGGAGAATGATTCAATAAAAAGTGCAATTGACATAATTGTTCAGCGTGATATAGGAAGAATTACTGTTGTGAAT GAACAGGGTAAAATATCCGGAATCGCTGACAGACAGGATCTTCTGGAGTCTGTTGTTAAAGGCTGGAGTGAATAA
Upstream 100 bases:
>100_bases AGGATTACGAATGAATCATTAAACCGCAATCACGAGTGAATTGTAAGCTTGAAATCTTGACTGTCAATTTTCTGTTTTAA TAAGGAGAGGAAGATAAACA
Downstream 100 bases:
>100_bases TCCTGAAAAATATAGAAAGTAGGTTTCGCGCAAAAGCATTATAACGATTAAAGATTATAAATAATAAAGATTACAGATTG GAAAACAAGAGTAAGTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Transduction Protein; CBS Domain Containing Membrane Protein; Inosine-5-Monophosphate Dehydrogenase Related Protein IV; CBS Domain-Containing Membrane Protein; Signal Transduction Protein With Cbs Domains; Signal Transduction Protein With CBS Domains; Two-Component Hybrid Sensor And Regulator; Inosine Monophosphate Dehydrogenase-Like Protein; CBS Domain-Containing Signal Transduction Protein; Related Inosine Monophosphate Dehydrogenase; Inosine-5-Monophosphate Dehydrogenase
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNVSEIMTEEPVSIKEGDFVTHARQLMRDYFFRGIVVVDEGNRLVGMLNDQDIMNVTSTRSNVTVSGYARQSPTITPDMD LVKAAKLMVQSKQNRVPVVKSTTDRTVVGILSDVDILRNVELPRNISKTIEAIMTKKVKTCSPDERVSKVWNYMIETDYT GIPVVSKKGDPIGMITRRDIIKSGALRMAIEDERATRPNESPKVEKIMSTPAYTLSENDSIKSAIDIIVQRDIGRITVVN EQGKISGIADRQDLLESVVKGWSE
Sequences:
>Translated_264_residues MNVSEIMTEEPVSIKEGDFVTHARQLMRDYFFRGIVVVDEGNRLVGMLNDQDIMNVTSTRSNVTVSGYARQSPTITPDMD LVKAAKLMVQSKQNRVPVVKSTTDRTVVGILSDVDILRNVELPRNISKTIEAIMTKKVKTCSPDERVSKVWNYMIETDYT GIPVVSKKGDPIGMITRRDIIKSGALRMAIEDERATRPNESPKVEKIMSTPAYTLSENDSIKSAIDIIVQRDIGRITVVN EQGKISGIADRQDLLESVVKGWSE >Mature_264_residues MNVSEIMTEEPVSIKEGDFVTHARQLMRDYFFRGIVVVDEGNRLVGMLNDQDIMNVTSTRSNVTVSGYARQSPTITPDMD LVKAAKLMVQSKQNRVPVVKSTTDRTVVGILSDVDILRNVELPRNISKTIEAIMTKKVKTCSPDERVSKVWNYMIETDYT GIPVVSKKGDPIGMITRRDIIKSGALRMAIEDERATRPNESPKVEKIMSTPAYTLSENDSIKSAIDIIVQRDIGRITVVN EQGKISGIADRQDLLESVVKGWSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29489; Mature: 29489
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSEIMTEEPVSIKEGDFVTHARQLMRDYFFRGIVVVDEGNRLVGMLNDQDIMNVTSTR CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHEECCC SNVTVSGYARQSPTITPDMDLVKAAKLMVQSKQNRVPVVKSTTDRTVVGILSDVDILRNV CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHCC ELPRNISKTIEAIMTKKVKTCSPDERVSKVWNYMIETDYTGIPVVSKKGDPIGMITRRDI CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEHHHHHH IKSGALRMAIEDERATRPNESPKVEKIMSTPAYTLSENDSIKSAIDIIVQRDIGRITVVN HHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEC EQGKISGIADRQDLLESVVKGWSE CCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNVSEIMTEEPVSIKEGDFVTHARQLMRDYFFRGIVVVDEGNRLVGMLNDQDIMNVTSTR CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHEECCC SNVTVSGYARQSPTITPDMDLVKAAKLMVQSKQNRVPVVKSTTDRTVVGILSDVDILRNV CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHCC ELPRNISKTIEAIMTKKVKTCSPDERVSKVWNYMIETDYTGIPVVSKKGDPIGMITRRDI CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEHHHHHH IKSGALRMAIEDERATRPNESPKVEKIMSTPAYTLSENDSIKSAIDIIVQRDIGRITVVN HHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEC EQGKISGIADRQDLLESVVKGWSE CCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA