| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is rimI [C]
Identifier: 21227395
GI number: 21227395
Start: 1536054
End: 1536584
Strand: Direct
Name: rimI [C]
Synonym: MM_1293
Alternate gene names: 21227395
Gene position: 1536054-1536584 (Clockwise)
Preceding gene: 21227394
Following gene: 21227398
Centisome position: 37.5
GC content: 42.56
Gene sequence:
>531_bases ATGATAAGACGGTTCGCACCTGAGGATTTCCAGGAAATAGTCGAAATCGAGGAAGAGGCTTTTTCGGAGCATAACTCCCT GGTGTATATGAATTTTTACGAAATGGTTGGAGACGGCTTTCTGGTTGCAGAACAGGAAGGAAAAGTCGTGGGGTATGTTG TAGGCTACCGTTCTGCAGAAAATGAAGGGCATATATTCTCCGTCGGCGTTAAAAAAGAATACAGGGGAAGGGGGATAGGC ACGGAACTTATCCATGCGATATGCGATATCTTTGTCGCAAACGGGCTCAGATACGCAAGACTCGAAGTAAGAACCAGTAA TACTGGTGCACAAAAATTATACAGATCGATAGGATTCACACAATGCTGGACTGAAAAAAAGTATTATTCAGATGGAGAAG ACGGTATGGTCATGAAAATGCATCTGCACCCATACCGCCTTTTGATCTCAAAACAAAAATATCTCGAACCCGTATTTTCG GACAACGAATTCTTTACTACTATAAGGGGCCCTATCAGTTATTACCGATAA
Upstream 100 bases:
>100_bases TGGACGTGAGGCATGTTAAAAAACTTTAATGCAGGTCTCTATAAAAGAGCAGTTTTTTCCTCGAAGAAGTAATAAAATGG TAGAAATATATAATGATATC
Downstream 100 bases:
>100_bases GTTTAATGACGGAATTCATGGAATCTCTCATATGGGCAGACGCTTCTTCAAAGATAGGGTCATCCCTTGACATGAGAGTG GCAAGCTCGCCTCCTAAAAT
Product: acetyltransferase
Products: CoA; ribosomal-protein N-acetyl-L-alanine
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIRRFAPEDFQEIVEIEEEAFSEHNSLVYMNFYEMVGDGFLVAEQEGKVVGYVVGYRSAENEGHIFSVGVKKEYRGRGIG TELIHAICDIFVANGLRYARLEVRTSNTGAQKLYRSIGFTQCWTEKKYYSDGEDGMVMKMHLHPYRLLISKQKYLEPVFS DNEFFTTIRGPISYYR
Sequences:
>Translated_176_residues MIRRFAPEDFQEIVEIEEEAFSEHNSLVYMNFYEMVGDGFLVAEQEGKVVGYVVGYRSAENEGHIFSVGVKKEYRGRGIG TELIHAICDIFVANGLRYARLEVRTSNTGAQKLYRSIGFTQCWTEKKYYSDGEDGMVMKMHLHPYRLLISKQKYLEPVFS DNEFFTTIRGPISYYR >Mature_176_residues MIRRFAPEDFQEIVEIEEEAFSEHNSLVYMNFYEMVGDGFLVAEQEGKVVGYVVGYRSAENEGHIFSVGVKKEYRGRGIG TELIHAICDIFVANGLRYARLEVRTSNTGAQKLYRSIGFTQCWTEKKYYSDGEDGMVMKMHLHPYRLLISKQKYLEPVFS DNEFFTTIRGPISYYR
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI14249280, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI10835057, Length=149, Percent_Identity=29.5302013422819, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17541270, Length=137, Percent_Identity=32.1167883211679, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.128
Molecular weight: Translated: 20447; Mature: 20447
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRFAPEDFQEIVEIEEEAFSEHNSLVYMNFYEMVGDGFLVAEQEGKVVGYVVGYRSAE CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEEECCCCEEEEEEEEECCC NEGHIFSVGVKKEYRGRGIGTELIHAICDIFVANGLRYARLEVRTSNTGAQKLYRSIGFT CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCCH QCWTEKKYYSDGEDGMVMKMHLHPYRLLISKQKYLEPVFSDNEFFTTIRGPISYYR HHHCCCCCCCCCCCCEEEEEECCHHHHHCCHHHHHCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MIRRFAPEDFQEIVEIEEEAFSEHNSLVYMNFYEMVGDGFLVAEQEGKVVGYVVGYRSAE CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEEECCCCEEEEEEEEECCC NEGHIFSVGVKKEYRGRGIGTELIHAICDIFVANGLRYARLEVRTSNTGAQKLYRSIGFT CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCCH QCWTEKKYYSDGEDGMVMKMHLHPYRLLISKQKYLEPVFSDNEFFTTIRGPISYYR HHHCCCCCCCCCCCCEEEEEECCHHHHHCCHHHHHCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acetyl-CoA; ribosomal-protein L-alanine
Specific reaction: acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N-acetyl-L-alanine
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]