| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227370
Identifier: 21227370
GI number: 21227370
Start: 1503431
End: 1503811
Strand: Reverse
Name: 21227370
Synonym: MM_1268
Alternate gene names: NA
Gene position: 1503811-1503431 (Counterclockwise)
Preceding gene: 21227372
Following gene: 21227368
Centisome position: 36.71
GC content: 40.68
Gene sequence:
>381_bases ATGAAAATATCTCAAGATGTAGAAGCTATAATTCATGAGAACATTTCGAGTAGTAAGGCTCCTAAATTTAATCATACGGC AGCTTCCATCGGTGCGGACGAGGATCTGCAAGTAGTATGCCTTGGAACTGATGGATTACCTTACCTTTTCTGGCAGGGAG GGGTCAAAAAAAGTCAATGGCATTATGAAGGAAAGTTGCTTCATGATAAAATCGAAGGTATCAAGTTTACTAGTGTGGCA GCTTCCATTGGTGCGGACAAGGATCTGCAAGTAGTATGCCTTGGAACTGATGGATTACCTTACCTTTTCTGGCAGGGAGG GGTCAAAAAAAGTCAATGGCATTATGAAGGAAAGTTGCTTCATGATAAAATAAAGGTGTAA
Upstream 100 bases:
>100_bases CTTGTGAAAACTCAAAAGCGCTTGACAAAACCAGTTATTATTTTAATGGTGATGAAACAGCCAAACACTTGGTTATTTGA TCAACATATGGAGGTATATG
Downstream 100 bases:
>100_bases AGTTTACTAGTTTGACAGTTTCAATTGGTGCAGACTGGGATTTCAATTAGTATGCTTTGGAACTGACGGATTAACTTGTA TTATCGCGAAAGACGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKISQDVEAIIHENISSSKAPKFNHTAASIGADEDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLLHDKIEGIKFTSVA ASIGADKDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLLHDKIKV
Sequences:
>Translated_126_residues MKISQDVEAIIHENISSSKAPKFNHTAASIGADEDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLLHDKIEGIKFTSVA ASIGADKDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLLHDKIKV >Mature_126_residues MKISQDVEAIIHENISSSKAPKFNHTAASIGADEDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLLHDKIEGIKFTSVA ASIGADKDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLLHDKIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13953; Mature: 13953
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISQDVEAIIHENISSSKAPKFNHTAASIGADEDLQVVCLGTDGLPYLFWQGGVKKSQW CCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCE HYEGKLLHDKIEGIKFTSVAASIGADKDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLL EECCEEEEHHCCCEEEEHEEHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEECCEEE HDKIKV CCEECC >Mature Secondary Structure MKISQDVEAIIHENISSSKAPKFNHTAASIGADEDLQVVCLGTDGLPYLFWQGGVKKSQW CCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCE HYEGKLLHDKIEGIKFTSVAASIGADKDLQVVCLGTDGLPYLFWQGGVKKSQWHYEGKLL EECCEEEEHHCCCEEEEHEEHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEECCEEE HDKIKV CCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA