The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227366

Identifier: 21227366

GI number: 21227366

Start: 1499821

End: 1500372

Strand: Direct

Name: 21227366

Synonym: MM_1264

Alternate gene names: NA

Gene position: 1499821-1500372 (Clockwise)

Preceding gene: 21227365

Following gene: 21227367

Centisome position: 36.61

GC content: 41.67

Gene sequence:

>552_bases
ATGAAAGGAAGAATAGATGGAAAGTACATAAAAAGTATCAGGCATGTCAAAACTGTAAGATTGACAGCAGTCCTGTTTGC
ATTCTTTATAGTTGCTCTTTCCGGCTGTGTTGAAAACGTCGAGGACGAGAAGAATAACACCACTGAAATAGAATACACTT
ACGGTATGGCAAATGTGGAGAGTATTGATATTCTGATTATGGAATCTTTTCCAGTGCAGATAAATGTAATAGCAGAAGGC
TATCTGCCTGATGGATGCACCAGGATTGACGAAATAAAGACCGAAAGGGAAGGAGAAACCTTCAATATCAATATCACGAC
AAAGCGTCCAAAAGATGCAATCTGCACCCAGGCTATAGAGAGCTTCAGGGAAACGATCCCCCTGGAAGTCCAGGGTCTCA
GAGCCGGAAATTATACTGTAAATGTAAATGGAGTGACCGGATCTTTTGAACTTACTGTCGATAATATCCTTAAGGAGACG
CCGGACTCTATGCCACCGGGACAGCAGGTAGTAACAGAAGCTGGTAATGGGACAAATATAAATATCGAATAG

Upstream 100 bases:

>100_bases
ATTAAAAAATGAAAGCTACGAACAGAACTGAAGTTTAAGCAAAAGATAAATTGGAACAGGCTTATTTTTTCATCTATATA
TTAAAAAAAGAGGGAGACAG

Downstream 100 bases:

>100_bases
GGCGAGAGTTTCTATCTTAGACTTAAGGATAACCCGTCTACAGGCTATTTGTGGGAATTAAACCTGAGCCAGGGACTTAA
TCTCACTGATATCAATGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF11; ORFC [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKGRIDGKYIKSIRHVKTVRLTAVLFAFFIVALSGCVENVEDEKNNTTEIEYTYGMANVESIDILIMESFPVQINVIAEG
YLPDGCTRIDEIKTEREGETFNINITTKRPKDAICTQAIESFRETIPLEVQGLRAGNYTVNVNGVTGSFELTVDNILKET
PDSMPPGQQVVTEAGNGTNINIE

Sequences:

>Translated_183_residues
MKGRIDGKYIKSIRHVKTVRLTAVLFAFFIVALSGCVENVEDEKNNTTEIEYTYGMANVESIDILIMESFPVQINVIAEG
YLPDGCTRIDEIKTEREGETFNINITTKRPKDAICTQAIESFRETIPLEVQGLRAGNYTVNVNGVTGSFELTVDNILKET
PDSMPPGQQVVTEAGNGTNINIE
>Mature_183_residues
MKGRIDGKYIKSIRHVKTVRLTAVLFAFFIVALSGCVENVEDEKNNTTEIEYTYGMANVESIDILIMESFPVQINVIAEG
YLPDGCTRIDEIKTEREGETFNINITTKRPKDAICTQAIESFRETIPLEVQGLRAGNYTVNVNGVTGSFELTVDNILKET
PDSMPPGQQVVTEAGNGTNINIE

Specific function: Could be a silencing control element for the regulation of the restriction system [H]

COG id: COG5513

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20266; Mature: 20266

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRIDGKYIKSIRHVKTVRLTAVLFAFFIVALSGCVENVEDEKNNTTEIEYTYGMANVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
SIDILIMESFPVQINVIAEGYLPDGCTRIDEIKTEREGETFNINITTKRPKDAICTQAIE
EEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHH
SFRETIPLEVQGLRAGNYTVNVNGVTGSFELTVDNILKETPDSMPPGQQVVTEAGNGTNI
HHHHCCCEEEEEEECCCEEEEEECCCCEEEEEHHHHHHHCCCCCCCCHHHHEECCCCCEE
NIE
EEC
>Mature Secondary Structure
MKGRIDGKYIKSIRHVKTVRLTAVLFAFFIVALSGCVENVEDEKNNTTEIEYTYGMANVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
SIDILIMESFPVQINVIAEGYLPDGCTRIDEIKTEREGETFNINITTKRPKDAICTQAIE
EEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHH
SFRETIPLEVQGLRAGNYTVNVNGVTGSFELTVDNILKETPDSMPPGQQVVTEAGNGTNI
HHHHCCCEEEEEEECCCEEEEEECCCCEEEEEHHHHHHHCCCCCCCCHHHHEECCCCCEE
NIE
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644308; 7607523 [H]