| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227367
Identifier: 21227367
GI number: 21227367
Start: 1500421
End: 1500654
Strand: Direct
Name: 21227367
Synonym: MM_1265
Alternate gene names: NA
Gene position: 1500421-1500654 (Clockwise)
Preceding gene: 21227366
Following gene: 21227369
Centisome position: 36.63
GC content: 45.3
Gene sequence:
>234_bases TTGTGGGAATTAAACCTGAGCCAGGGACTTAATCTCACTGATATCAATGGAACATTTTATTCCCCAGACTCTCAGGAGGA TACTCCACCTCTTGTTGGTGCTGGAGGAGTCCGTGAGTGGGAAATTAAAGCGGATTCCGAGGGCGCCCAGCAGGTAACAG CGGTATATAAAAGGCCCTGGGAAAATGAAACAGGAACCGAAGACAGATTTATACTTAATGTTGATGTTTTCTGA
Upstream 100 bases:
>100_bases ACAGCAGGTAGTAACAGAAGCTGGTAATGGGACAAATATAAATATCGAATAGGGCGAGAGTTTCTATCTTAGACTTAAGG ATAACCCGTCTACAGGCTAT
Downstream 100 bases:
>100_bases GCAGTAATCTCATTTTTCATGCCTCTGATTCTTTTTACTTTCTCCTCATAGAGGCATGAAATATTTCTCTTAAGGACCGC ATCGGCTTCAAGAGCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MWELNLSQGLNLTDINGTFYSPDSQEDTPPLVGAGGVREWEIKADSEGAQQVTAVYKRPWENETGTEDRFILNVDVF
Sequences:
>Translated_77_residues MWELNLSQGLNLTDINGTFYSPDSQEDTPPLVGAGGVREWEIKADSEGAQQVTAVYKRPWENETGTEDRFILNVDVF >Mature_77_residues MWELNLSQGLNLTDINGTFYSPDSQEDTPPLVGAGGVREWEIKADSEGAQQVTAVYKRPWENETGTEDRFILNVDVF
Specific function: Unknown
COG id: COG5513
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8648; Mature: 8648
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWELNLSQGLNLTDINGTFYSPDSQEDTPPLVGAGGVREWEIKADSEGAQQVTAVYKRPW CEECCCCCCCCEEECCCEEECCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCC ENETGTEDRFILNVDVF CCCCCCCCEEEEEEECC >Mature Secondary Structure MWELNLSQGLNLTDINGTFYSPDSQEDTPPLVGAGGVREWEIKADSEGAQQVTAVYKRPW CEECCCCCCCCEEECCCEEECCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCC ENETGTEDRFILNVDVF CCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA