| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227353
Identifier: 21227353
GI number: 21227353
Start: 1483355
End: 1484467
Strand: Reverse
Name: 21227353
Synonym: MM_1251
Alternate gene names: NA
Gene position: 1484467-1483355 (Counterclockwise)
Preceding gene: 21227354
Following gene: 21227352
Centisome position: 36.24
GC content: 42.86
Gene sequence:
>1113_bases ATGGCTCTTGAACCAGGAATTTTAGCTGGATTTCTTGTAATCTTCCTGGCCGTATTGCTCGGCCCTTTTAAGATACATGT TATTGAGGAAAATCTGGAACCATTTTTGCTTGTTTGCGGTATCGCAGCAATGACTCTTTCAGGTTTTGTCGAACTGCCAG GTGAAGAGACTGGCTGGCGGATGGAAATCATCGAAGAATCACTGACTTCACCTCTGCACGTTGGAGATATTTTTGGCATT CCAATAGGCATATTCCAGATTGTGCTTGTTGTCGGTTTGATTATTTACAAATGGCATGATCCGATCCACAAAGCAATCAG AAAGCTTACCGATATCCTTTCTGTTAAAGTCTTGGGTTTTCTCCTGATTGTTGTTCTTGGCTTATCCTCAAGTGTTATGT CGGCTATCCTTGCTGCAATTATTCTCGTTGAGGTAGTTAATGCGATGCCTCTTTCTCGCAAGTCCAAGATCGACCTTACA ATCATTGCATGTTTTTCAATTGGACTTGGAGCAGCACTTACCCCCCTCGGAGAACCTCTTTCAACAATCGCCATCTCAAA GTTAGCCGGTGAACCTTACCACGCTGATTTCATGTTTTTGTTCAACATGCTTGGTAAATATATCTTCCCGGGTATCTTTG CGTTTGGTCTTTTAGGAGTTTTCTTCCTTGGAAAAGCTGACCCGAAAGATGCAGGAATGAAAGCAGCAGATTATAACGAA ACTGTAAAGGACGTTATAATGAGAGCTGTAAAAGTCTACGTATTCATTGCAGCACTCGTGTTGCTCGGCGAAGGTTTCAA GCCTCTTATCCTTGAATACTTTATCCAGATTCCTTCTGGCATTCTCTACTGGGTTAACATGGTTTCTGCTATCCTTGATA ATGCTACCCTTTGCGCTGCTGAAATCGGGCCAGCTCTCAGTGAGATACAGATAAGGAGTATACTTATGGGGCTTTTAATT GCTGGTGGTATGCTCATCCCTGGAAATATCCCGAACATTATCTCTGCAGGAAAACTTGGTATTACCAGTAAAGAATGGGC AAGGCTTGGAGTGCCCCTTGGGCTTGTCGCAATGGCTATCTATTTCGTCGTTATCTTCGTACTTGGAATATAA
Upstream 100 bases:
>100_bases TTATAAGGTAAAAAATTCGGAACTCAAAGCGTTCAACAGTAGGCGAATTTTACAGGCTTTAATTCTCTAGAATAATAATT TTAAGGAGGAAAAAATAGTA
Downstream 100 bases:
>100_bases GCTCAAAGTGCACCCATTCGAGTGTAATTATATAGTGTAATTATATGTTTCAGATTCGGTGATAAAATAAACTTTAAAAT CACTGAATTCTGGAACAAAT
Product: cation transporter
Products: NA
Alternate protein names: Cation Transporter-Like Protein; Mg Transporter
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVELPGEETGWRMEIIEESLTSPLHVGDIFGI PIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGFLLIVVLGLSSSVMSAILAAIILVEVVNAMPLSRKSKIDLT IIACFSIGLGAALTPLGEPLSTIAISKLAGEPYHADFMFLFNMLGKYIFPGIFAFGLLGVFFLGKADPKDAGMKAADYNE TVKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAAEIGPALSEIQIRSILMGLLI AGGMLIPGNIPNIISAGKLGITSKEWARLGVPLGLVAMAIYFVVIFVLGI
Sequences:
>Translated_370_residues MALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVELPGEETGWRMEIIEESLTSPLHVGDIFGI PIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGFLLIVVLGLSSSVMSAILAAIILVEVVNAMPLSRKSKIDLT IIACFSIGLGAALTPLGEPLSTIAISKLAGEPYHADFMFLFNMLGKYIFPGIFAFGLLGVFFLGKADPKDAGMKAADYNE TVKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAAEIGPALSEIQIRSILMGLLI AGGMLIPGNIPNIISAGKLGITSKEWARLGVPLGLVAMAIYFVVIFVLGI >Mature_369_residues ALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVELPGEETGWRMEIIEESLTSPLHVGDIFGIP IGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGFLLIVVLGLSSSVMSAILAAIILVEVVNAMPLSRKSKIDLTI IACFSIGLGAALTPLGEPLSTIAISKLAGEPYHADFMFLFNMLGKYIFPGIFAFGLLGVFFLGKADPKDAGMKAADYNET VKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAAEIGPALSEIQIRSILMGLLIA GGMLIPGNIPNIISAGKLGITSKEWARLGVPLGLVAMAIYFVVIFVLGI
Specific function: Unknown
COG id: COG4756
COG function: function code R; Predicted cation transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39735; Mature: 39603
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVELPGEETGWR CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH MEIIEESLTSPLHVGDIFGIPIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGF HHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LLIVVLGLSSSVMSAILAAIILVEVVNAMPLSRKSKIDLTIIACFSIGLGAALTPLGEPL HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH STIAISKLAGEPYHADFMFLFNMLGKYIFPGIFAFGLLGVFFLGKADPKDAGMKAADYNE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHH TVKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH EIGPALSEIQIRSILMGLLIAGGMLIPGNIPNIISAGKLGITSKEWARLGVPLGLVAMAI HHCHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHCCCCCCCCHHHHHHHCCCHHHHHHHH YFVVIFVLGI HHHHHHHHCC >Mature Secondary Structure ALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVELPGEETGWR CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH MEIIEESLTSPLHVGDIFGIPIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGF HHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LLIVVLGLSSSVMSAILAAIILVEVVNAMPLSRKSKIDLTIIACFSIGLGAALTPLGEPL HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH STIAISKLAGEPYHADFMFLFNMLGKYIFPGIFAFGLLGVFFLGKADPKDAGMKAADYNE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHH TVKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH EIGPALSEIQIRSILMGLLIAGGMLIPGNIPNIISAGKLGITSKEWARLGVPLGLVAMAI HHCHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHCCCCCCCCHHHHHHHCCCHHHHHHHH YFVVIFVLGI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA