| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227354
Identifier: 21227354
GI number: 21227354
Start: 1485116
End: 1486228
Strand: Reverse
Name: 21227354
Synonym: MM_1252
Alternate gene names: NA
Gene position: 1486228-1485116 (Counterclockwise)
Preceding gene: 21227355
Following gene: 21227353
Centisome position: 36.28
GC content: 41.6
Gene sequence:
>1113_bases ATGGCTCTTGAACCAGGAATTTTAGCTGGATTTCTTGTAATATTCTTGGCCGTATTGCTCGGCCCTTTTAAGATACATGT TATTGAGGAAAATCTGGAACCATTTTTGCTTGTTTGTGGTATCGCAGCAATGACTCTTTCAGGTTTTGTCAAAATCCCCG GTGAAGAGACTGGCTGGCGGATGGAAATCATCGAAGAATCACTGACTTCACCTCTGCACGTTGGAGATATTTTTGGCATT CCAATCGGCATATTCCAGATTGTGCTTGTTGTCGGTTTGATTATTTATAAATGGCATGATCCGATCCACAAAGCAATCAG AAAGCTTACCGATATCCTTTCTGTTAAAGTCTTGGGTTTTCTTCTAATTGTTGTTCTTGGCTTATCCTCAAGTGTTATGT CAGCTATTCTTGCTGCAATTATTCTTGTTGAGGTAGTTAATGCAATGCCACTTCCTCGTAAGTCCAAGATCGACCTTACA ATCATTGCATGTTTCTCAATCGGACTTGGCGCTGCGCTTACTCCCCTTGGAGAACCTCTCTCAACAATTGCTGTTTCAAA GTTAGCCGGTGAACCTTACCACGCTGATTTCATGTTTTTGTTCAATATGCTTGGTAAATACATTATTCCAGGTATCTTCG CTTTCGGTATTGTTGGAGTGTTTTTCCTTGGAAAAGTTGATACTAAAGATGCAGGGATGAAAGCAGCAGATTATAACGAG ACTATAAAGGACGTTATAATGAGAGCTGTAAAAGTCTACGTATTCATTGCAGCACTCGTGTTGCTCGGCGAAGGTTTCAA GCCTCTTATCCTTGAATACTTTATCCAGATTCCTTCTGGCATTCTCTACTGGGTTAACATGGTTTCTGCTATCCTTGATA ATGCTACCCTTTGCGCTGCTGAAATCGGACCTGCTCTCAGTGAGATACAGATAAGGAGTATACTTATGGGTCTTTTACTC TCAGGTGGTATGCTTATCCCTGGAAATATCCCTAACATTATCTCCGCAGGAAAACTTGGTATTACCAGTAAAGAATGGGC AAGGCTCGGTTTCCCACTCGGGATCGTCGCGATGGCTGTCTATTTCGTCGTTATCTTCGTACTTGGAATATAA
Upstream 100 bases:
>100_bases AACACTAAAACATTCTAGCCTCTAAAGGAGTTTAACAGTATAATAAACTCTTAAAGAATTTTGTGGTCTAGATTGATAAC TATAGGAGGAAAAAATAGTA
Downstream 100 bases:
>100_bases GCTCAAAATATGCTCATTCAGCTATACTGATTTAGTTTCAGAATCCGGTGATAAATAAACTTCAAAATCACTGAATTCTG GAACAAATTTTGTTACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cation Transporter-Like Protein; Mg Transporter
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVKIPGEETGWRMEIIEESLTSPLHVGDIFGI PIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGFLLIVVLGLSSSVMSAILAAIILVEVVNAMPLPRKSKIDLT IIACFSIGLGAALTPLGEPLSTIAVSKLAGEPYHADFMFLFNMLGKYIIPGIFAFGIVGVFFLGKVDTKDAGMKAADYNE TIKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAAEIGPALSEIQIRSILMGLLL SGGMLIPGNIPNIISAGKLGITSKEWARLGFPLGIVAMAVYFVVIFVLGI
Sequences:
>Translated_370_residues MALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVKIPGEETGWRMEIIEESLTSPLHVGDIFGI PIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGFLLIVVLGLSSSVMSAILAAIILVEVVNAMPLPRKSKIDLT IIACFSIGLGAALTPLGEPLSTIAVSKLAGEPYHADFMFLFNMLGKYIIPGIFAFGIVGVFFLGKVDTKDAGMKAADYNE TIKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAAEIGPALSEIQIRSILMGLLL SGGMLIPGNIPNIISAGKLGITSKEWARLGFPLGIVAMAVYFVVIFVLGI >Mature_369_residues ALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVKIPGEETGWRMEIIEESLTSPLHVGDIFGIP IGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGFLLIVVLGLSSSVMSAILAAIILVEVVNAMPLPRKSKIDLTI IACFSIGLGAALTPLGEPLSTIAVSKLAGEPYHADFMFLFNMLGKYIIPGIFAFGIVGVFFLGKVDTKDAGMKAADYNET IKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAAEIGPALSEIQIRSILMGLLLS GGMLIPGNIPNIISAGKLGITSKEWARLGFPLGIVAMAVYFVVIFVLGI
Specific function: Unknown
COG id: COG4756
COG function: function code R; Predicted cation transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39778; Mature: 39647
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVKIPGEETGWR CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCEECCCCCCCHH MEIIEESLTSPLHVGDIFGIPIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGF HHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LLIVVLGLSSSVMSAILAAIILVEVVNAMPLPRKSKIDLTIIACFSIGLGAALTPLGEPL HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHH STIAVSKLAGEPYHADFMFLFNMLGKYIIPGIFAFGIVGVFFLGKVDTKDAGMKAADYNE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH TIKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH EIGPALSEIQIRSILMGLLLSGGMLIPGNIPNIISAGKLGITSKEWARLGFPLGIVAMAV HHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCHHCCCCCCCCHHHHHHHCCCHHHHHHHH YFVVIFVLGI HHHHHHHHCC >Mature Secondary Structure ALEPGILAGFLVIFLAVLLGPFKIHVIEENLEPFLLVCGIAAMTLSGFVKIPGEETGWR CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCEECCCCCCCHH MEIIEESLTSPLHVGDIFGIPIGIFQIVLVVGLIIYKWHDPIHKAIRKLTDILSVKVLGF HHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LLIVVLGLSSSVMSAILAAIILVEVVNAMPLPRKSKIDLTIIACFSIGLGAALTPLGEPL HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHH STIAVSKLAGEPYHADFMFLFNMLGKYIIPGIFAFGIVGVFFLGKVDTKDAGMKAADYNE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH TIKDVIMRAVKVYVFIAALVLLGEGFKPLILEYFIQIPSGILYWVNMVSAILDNATLCAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH EIGPALSEIQIRSILMGLLLSGGMLIPGNIPNIISAGKLGITSKEWARLGFPLGIVAMAV HHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCHHCCCCCCCCHHHHHHHCCCHHHHHHHH YFVVIFVLGI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA