Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is mmr [H]

Identifier: 21227337

GI number: 21227337

Start: 1461900

End: 1462820

Strand: Direct

Name: mmr [H]

Synonym: MM_1235

Alternate gene names: 21227337

Gene position: 1461900-1462820 (Clockwise)

Preceding gene: 21227336

Following gene: 21227338

Centisome position: 35.69

GC content: 41.15

Gene sequence:

>921_bases
ATGGCAATTCCAGATTATCAGGCTGTAATGCTCCCTTTGTTGAAATATGCAGGAGACGGTAAAGAGCACCACATTCGCGA
TGCAATAGAAAAACTGGCCGAAGAATTCGAGCTGAGTGAAGAGGAAAGAAAAGAACTTCTACCGAGTGGTCAACAGGCTA
TTTTTAAGAACAGAATAGGATGGGCTAATACTTATCTGAAAAAGGCTGGACTACTGGGTTCCAGAAAAAAAGGATATTTT
TCCATTACCCGGAGAGGACTGGATGTTCTCAGAGAAAAACCTCCTTCCATTGATGTCAGTTTTCTGAAGAGATACAAGGA
ATTTAATGAATTTTACAATAAGGACAAACAGGTTTTAATTGACAAGCCAGATGTTCCCGAAGCGGAAGGAAAAAGAGCTC
TCGACCCCGAAGAATCTCTCGAAATCGCATATCAGAAACTTCACAACGAACTTGTTTCCGAAATAATTTCTACTACTAAA
AAATGCTCTCCTGCTTTCTTTGAATCACTGGTTGTTGACGTTCTGACAAAAATGGGATATGGGGGTTCAAGAGTCGATGC
CGGAAAAGCGATTGGCAAAAGCCATGACGGCGGCATTGATGGCATCATAAAAGAAGACAGGCTAGGGCTCGATGTAATTT
ATATACAGGCGAAGCGCTGGGAAGGTACGGTATCAAAACCTGAAATCCAGAAGTTTGCCGGAGCTCTTATAGGTAAGAAG
GCTAAGAAAGGCGTTTTCATAACGACCTCAAGCTTTTCAAAAGAGGCTATTGAATATGCCGACTTTACAGGAAATATTGT
CCTGGTTGACGGGGAAATGCTTGCACGGCTAATGATTGAGTATAACGTTGGGGTTTCGAGGGTAAAATCATATGAAGTCA
AAAAGATGGATACAGATTATTTTGAAGATGGAGTAATCTAA

Upstream 100 bases:

>100_bases
GGAATATAACCTGAAGCCGACATAAAGAAAAAATAGCAAATCATAAAAAGAAGGTCACTCAAAGTTCTTAGTAGAATTAA
TCAGGCTTTCGAGTGATTTA

Downstream 100 bases:

>100_bases
AAAATTTCTTTCAACAAATAATATATACCTGAAGTCCCCATATAATGGTTTGAAATCAAACCAATATTGCATACAAAAGC
ATACAAAATATAAATATATC

Product: 5-methylcytosine-specific restriction enzyme

Products: NA

Alternate protein names: EcoKMrr [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAIPDYQAVMLPLLKYAGDGKEHHIRDAIEKLAEEFELSEEERKELLPSGQQAIFKNRIGWANTYLKKAGLLGSRKKGYF
SITRRGLDVLREKPPSIDVSFLKRYKEFNEFYNKDKQVLIDKPDVPEAEGKRALDPEESLEIAYQKLHNELVSEIISTTK
KCSPAFFESLVVDVLTKMGYGGSRVDAGKAIGKSHDGGIDGIIKEDRLGLDVIYIQAKRWEGTVSKPEIQKFAGALIGKK
AKKGVFITTSSFSKEAIEYADFTGNIVLVDGEMLARLMIEYNVGVSRVKSYEVKKMDTDYFEDGVI

Sequences:

>Translated_306_residues
MAIPDYQAVMLPLLKYAGDGKEHHIRDAIEKLAEEFELSEEERKELLPSGQQAIFKNRIGWANTYLKKAGLLGSRKKGYF
SITRRGLDVLREKPPSIDVSFLKRYKEFNEFYNKDKQVLIDKPDVPEAEGKRALDPEESLEIAYQKLHNELVSEIISTTK
KCSPAFFESLVVDVLTKMGYGGSRVDAGKAIGKSHDGGIDGIIKEDRLGLDVIYIQAKRWEGTVSKPEIQKFAGALIGKK
AKKGVFITTSSFSKEAIEYADFTGNIVLVDGEMLARLMIEYNVGVSRVKSYEVKKMDTDYFEDGVI
>Mature_305_residues
AIPDYQAVMLPLLKYAGDGKEHHIRDAIEKLAEEFELSEEERKELLPSGQQAIFKNRIGWANTYLKKAGLLGSRKKGYFS
ITRRGLDVLREKPPSIDVSFLKRYKEFNEFYNKDKQVLIDKPDVPEAEGKRALDPEESLEIAYQKLHNELVSEIISTTKK
CSPAFFESLVVDVLTKMGYGGSRVDAGKAIGKSHDGGIDGIIKEDRLGLDVIYIQAKRWEGTVSKPEIQKFAGALIGKKA
KKGVFITTSSFSKEAIEYADFTGNIVLVDGEMLARLMIEYNVGVSRVKSYEVKKMDTDYFEDGVI

Specific function: Involved in the acceptance of foreign DNA which is modified. Restricts both adenine- and cytosine-methylated DNA [H]

COG id: COG1715

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790811, Length=307, Percent_Identity=40.0651465798046, Blast_Score=194, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR007560 [H]

Pfam domain/function: PF04471 Mrr_cat [H]

EC number: NA

Molecular weight: Translated: 34404; Mature: 34273

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPDYQAVMLPLLKYAGDGKEHHIRDAIEKLAEEFELSEEERKELLPSGQQAIFKNRIG
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCC
WANTYLKKAGLLGSRKKGYFSITRRGLDVLREKPPSIDVSFLKRYKEFNEFYNKDKQVLI
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
DKPDVPEAEGKRALDPEESLEIAYQKLHNELVSEIISTTKKCSPAFFESLVVDVLTKMGY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
GGSRVDAGKAIGKSHDGGIDGIIKEDRLGLDVIYIQAKRWEGTVSKPEIQKFAGALIGKK
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
AKKGVFITTSSFSKEAIEYADFTGNIVLVDGEMLARLMIEYNVGVSRVKSYEVKKMDTDY
CCCCEEEEECCCCHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
FEDGVI
HCCCCC
>Mature Secondary Structure 
AIPDYQAVMLPLLKYAGDGKEHHIRDAIEKLAEEFELSEEERKELLPSGQQAIFKNRIG
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCC
WANTYLKKAGLLGSRKKGYFSITRRGLDVLREKPPSIDVSFLKRYKEFNEFYNKDKQVLI
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
DKPDVPEAEGKRALDPEESLEIAYQKLHNELVSEIISTTKKCSPAFFESLVVDVLTKMGY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
GGSRVDAGKAIGKSHDGGIDGIIKEDRLGLDVIYIQAKRWEGTVSKPEIQKFAGALIGKK
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
AKKGVFITTSSFSKEAIEYADFTGNIVLVDGEMLARLMIEYNVGVSRVKSYEVKKMDTDY
CCCCEEEEECCCCHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
FEDGVI
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650347; 7610040; 9278503 [H]