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The map label for this gene is 21227327

Identifier: 21227327

GI number: 21227327

Start: 1451901

End: 1453064

Strand: Direct

Name: 21227327

Synonym: MM_1225

Alternate gene names: NA

Gene position: 1451901-1453064 (Clockwise)

Preceding gene: 21227325

Following gene: 21227328

Centisome position: 35.44

GC content: 46.05

Gene sequence:

>1164_bases
ATGCCGTTAGATCCTATTTGCAAAAAAATAATATCCAGGGATACTGAATACTTTTCGGATTACGGGGGAAAAAATTACTA
TTTCTGCAGTTCCGAATGCAAGCATAAATTTGATGCACTTGAAAAAAGCGTCATCAGGCTCAAAAGAAACCTGAGCGAAA
AAGAAAAAATTTCATTTGGAAAACTAAAGAGAGATATTATAAAACCGGGAATCTGCACTCTTTGCGGAGCCTGTGCAGCA
AGCTGTGAGTATATAACCATCAAAGATGAAAAGCCTGAACTGATCGGTCCCTGCAAAGCCTGTGGGGTCTGCTACTACCA
GTGCCCCAGAACTATCACTACGGAAGAAGGGCTGATAGGTAGCTTCAGGTATGCTTATGCTGCACAGTCTGCCATACCGG
AAATAAAAGGTCAGGACGGAGGGGTTGTGACTTCTCTTCTTCTGTATGCTCTGGACGAGGGGCTTATCGACTGCGCCGTG
GTCACGGTTCATTCAGAAGAAGAACCCTGGAAACCCGTACCCATAGTTGCAAAAACCAGGGAAGAGATCCTGAAGAGTAG
CGGCAGCATTTACTCCCATTCGATGACACTGGAAGCCCTTATGAGCGCAGTCAAACAGGGAATGAACAGCGTTGCCTTCG
TAGGTACGAGCTGCAATATCGATGCAGTCACAAAAATGCAAAAAAGCTCTTACGGTTTTCTGCACCTCTTTATGAGGGCG
AAGGTCCTCAAACTGGGACTTTTCTGCATGGACACTTTTGCCTACGAAGGGATCAAAGCAGTACTGGAAAGCTATGGGAT
CACTCTTGACAACGTCGATGCCATGAAAATCCGAAAAGGGAAATTCGAGGTCGCCCTGAAAGATGGAAAAGAACACATCT
TCGAACTCAGCGAATTTGACGAATACAGAAGCTCCTCCTGCCGTTTCTGTACAGACCTGACAGCCGAAAACTCAGACATT
TCCTTCGGAGGAGTAGGCAGTCCCAGAGGCTACACTACAGTCCTTGCCCGTTCAGCCATAGGCTATGAAATCTTCAACGA
AGCCATAGACAATGGCTACATCGAAGCCCGTCAGCTTACGGATGACGAACTCGAAAAAGTCCTCAACCTGGCAAAGATGA
AAAAGGTACAGATGTACGACCTGCACAGAAGGCAGAAAACATAA

Upstream 100 bases:

>100_bases
CAGATTGAAGAGCAATTTTAGATTTTTTCAAGAATCGGGAACTAGTGAATCAGGCACTAGTTATCCTTAAATATGGGGCA
ATAATCACAGGAGGTCTTTA

Downstream 100 bases:

>100_bases
TAAGCATAAATAAGTCCTCTTGAGCGAGCGAAGCGAGTGAAAAGGACCGCGTACTCCCGAGGTGCAATTCGGGCGAGATG
AATATATATTTATTTCATAA

Product: coenzyme F420 hydrogenase subunit beta

Products: reduced coenzyme F420

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MPLDPICKKIISRDTEYFSDYGGKNYYFCSSECKHKFDALEKSVIRLKRNLSEKEKISFGKLKRDIIKPGICTLCGACAA
SCEYITIKDEKPELIGPCKACGVCYYQCPRTITTEEGLIGSFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAV
VTVHSEEEPWKPVPIVAKTREEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSCNIDAVTKMQKSSYGFLHLFMRA
KVLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIRKGKFEVALKDGKEHIFELSEFDEYRSSSCRFCTDLTAENSDI
SFGGVGSPRGYTTVLARSAIGYEIFNEAIDNGYIEARQLTDDELEKVLNLAKMKKVQMYDLHRRQKT

Sequences:

>Translated_387_residues
MPLDPICKKIISRDTEYFSDYGGKNYYFCSSECKHKFDALEKSVIRLKRNLSEKEKISFGKLKRDIIKPGICTLCGACAA
SCEYITIKDEKPELIGPCKACGVCYYQCPRTITTEEGLIGSFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAV
VTVHSEEEPWKPVPIVAKTREEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSCNIDAVTKMQKSSYGFLHLFMRA
KVLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIRKGKFEVALKDGKEHIFELSEFDEYRSSSCRFCTDLTAENSDI
SFGGVGSPRGYTTVLARSAIGYEIFNEAIDNGYIEARQLTDDELEKVLNLAKMKKVQMYDLHRRQKT
>Mature_386_residues
PLDPICKKIISRDTEYFSDYGGKNYYFCSSECKHKFDALEKSVIRLKRNLSEKEKISFGKLKRDIIKPGICTLCGACAAS
CEYITIKDEKPELIGPCKACGVCYYQCPRTITTEEGLIGSFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAVV
TVHSEEEPWKPVPIVAKTREEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSCNIDAVTKMQKSSYGFLHLFMRAK
VLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIRKGKFEVALKDGKEHIFELSEFDEYRSSSCRFCTDLTAENSDIS
FGGVGSPRGYTTVLARSAIGYEIFNEAIDNGYIEARQLTDDELEKVLNLAKMKKVQMYDLHRRQKT

Specific function: Unknown

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR005117
- InterPro:   IPR006067
- InterPro:   IPR006066 [H]

Pfam domain/function: PF00037 Fer4; PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N; PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: 1.12.98.1

Molecular weight: Translated: 43192; Mature: 43061

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDPICKKIISRDTEYFSDYGGKNYYFCSSECKHKFDALEKSVIRLKRNLSEKEKISFG
CCCCHHHHHHHHCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KLKRDIIKPGICTLCGACAASCEYITIKDEKPELIGPCKACGVCYYQCPRTITTEEGLIG
HHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCEEHEECCCCCCCCCCCHH
SFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAVVTVHSEEEPWKPVPIVAKTR
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHH
EEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSCNIDAVTKMQKSSYGFLHLFMRA
HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHH
KVLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIRKGKFEVALKDGKEHIFELSEFD
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHEEECCCEEEEEECCHHHHHHHHHHH
EYRSSSCRFCTDLTAENSDISFGGVGSPRGYTTVLARSAIGYEIFNEAIDNGYIEARQLT
HHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHCC
DDELEKVLNLAKMKKVQMYDLHRRQKT
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLDPICKKIISRDTEYFSDYGGKNYYFCSSECKHKFDALEKSVIRLKRNLSEKEKISFG
CCCHHHHHHHHCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KLKRDIIKPGICTLCGACAASCEYITIKDEKPELIGPCKACGVCYYQCPRTITTEEGLIG
HHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCEEHEECCCCCCCCCCCHH
SFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAVVTVHSEEEPWKPVPIVAKTR
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHH
EEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSCNIDAVTKMQKSSYGFLHLFMRA
HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHH
KVLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIRKGKFEVALKDGKEHIFELSEFD
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHEEECCCEEEEEECCHHHHHHHHHHH
EYRSSSCRFCTDLTAENSDISFGGVGSPRGYTTVLARSAIGYEIFNEAIDNGYIEARQLT
HHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHCC
DDELEKVLNLAKMKKVQMYDLHRRQKT
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2; coenzyme F420

Specific reaction: H2 + coenzyme F420 = reduced coenzyme F420

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]