| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227325
Identifier: 21227325
GI number: 21227325
Start: 1449203
End: 1449529
Strand: Direct
Name: 21227325
Synonym: MM_1223
Alternate gene names: NA
Gene position: 1449203-1449529 (Clockwise)
Preceding gene: 21227324
Following gene: 21227327
Centisome position: 35.38
GC content: 46.79
Gene sequence:
>327_bases ATGGACGATGCTAAGGAAATCACAGCGGTAGGGCGGAACAAAAAAACTATCAAAGTGGGAGATGCTGTCAAGTACGTAAA TAGCGATACTGTAAGTCGTATTGCCGAGATCAAAAAGGACGACCAGGGGAAAGTCTGGGTCCTGCTCGAAACAACCGATC TATGGTATAAAGAAGAGACTCTGGAATATACTGATATCAAGCCCCCGGAAAAGAAAGAACAAAGAGAATTTACTGCCGAA GAGCTGGAAGAGAGGTTCAGGAAAGAAAGGGAAACGATTCAGGCCTTCGATCTCGGAAAAGCCGGAGGAGGAGGGGCAGG AGGCTAA
Upstream 100 bases:
>100_bases ACTTTATTAAAGGACCTGAATAACCTATAAGCATATATTGAAAAAGGAGTGGACTTGCAGGGCCTGAAGTACCGCGTCCT GGAAGCCTCGAGGTGAAAGC
Downstream 100 bases:
>100_bases CTTATCCTGCCTTTACTTTACCCTGCTTTTTTATTCAGGAATTCAATGCCTGCCTTTAAACAGCTATTTCTTTTGTTTAT GTGAGCTATATTAAGAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MDDAKEITAVGRNKKTIKVGDAVKYVNSDTVSRIAEIKKDDQGKVWVLLETTDLWYKEETLEYTDIKPPEKKEQREFTAE ELEERFRKERETIQAFDLGKAGGGGAGG
Sequences:
>Translated_108_residues MDDAKEITAVGRNKKTIKVGDAVKYVNSDTVSRIAEIKKDDQGKVWVLLETTDLWYKEETLEYTDIKPPEKKEQREFTAE ELEERFRKERETIQAFDLGKAGGGGAGG >Mature_108_residues MDDAKEITAVGRNKKTIKVGDAVKYVNSDTVSRIAEIKKDDQGKVWVLLETTDLWYKEETLEYTDIKPPEKKEQREFTAE ELEERFRKERETIQAFDLGKAGGGGAGG
Specific function: Unknown
COG id: COG4014
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12239; Mature: 12239
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDAKEITAVGRNKKTIKVGDAVKYVNSDTVSRIAEIKKDDQGKVWVLLETTDLWYKEET CCCHHHHHHCCCCCCEEECCCHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCEECCCC LEYTDIKPPEKKEQREFTAEELEERFRKERETIQAFDLGKAGGGGAGG CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDDAKEITAVGRNKKTIKVGDAVKYVNSDTVSRIAEIKKDDQGKVWVLLETTDLWYKEET CCCHHHHHHCCCCCCEEECCCHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCEECCCC LEYTDIKPPEKKEQREFTAEELEERFRKERETIQAFDLGKAGGGGAGG CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA