Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227311

Identifier: 21227311

GI number: 21227311

Start: 1432543

End: 1433163

Strand: Direct

Name: 21227311

Synonym: MM_1209

Alternate gene names: NA

Gene position: 1432543-1433163 (Clockwise)

Preceding gene: 21227310

Following gene: 21227312

Centisome position: 34.97

GC content: 38.0

Gene sequence:

>621_bases
GTGAACCTGAATATTGAATACATTAAAAAACTTATGGGCTGGTGCCCGAATGCCAGAGCATCTGAAGCCAGACGAAATGT
TAGCTGTGAGAATTTTGATTCTGATGTTCCGGAAAGAGCAGGGGGAGAAAACGGAGGTCTGAAAAATACAGGATGGTTCC
GGAAGTCGAGTAGCAGAATTCTCTTAGTTGATTCTTTTCTTACACTTACATATCTCCTGGTAATGATCCAATTGGGCGTA
AATGTAGTGACTTTACTCGCTGGATTTTTCATTTCCTTAACTTTTTTCATTTTTGGCTGGAAGAAGCAGATGCAAAGGTA
CGATACTCTCGCACAAAAACTCGTTCTTGATGATTCCAACAAGAAAAACCTGTATAAAAAACTTTTTCGAATAATAACTC
TGATCTTCTATGCCACACTTTTTTACTGGATTTTTGCAGGAGATTTGGAAAGAAATTTTCTCATGAAAGGAACCCTTTCT
TTCTTTGCAGGCGGACTCGCCTTCATGTGGCTTGGCTATCTTCAGATACTATACTGGGAAAGGAAGAATCACAAAACGAT
CTATTTTGATAAAAAGTATGGAAAGTGGAAAAATTCGTATATCATTCGGGAGAGAAAATAA

Upstream 100 bases:

>100_bases
AGCTAATTTACTGGGAGAAGGAAAACCATATGAAAATTTATATAAAAAGTGAGAAGGGATTCCAGAAGATGTATGCACTT
GGAGAAAAGGAGAGGGAACT

Downstream 100 bases:

>100_bases
ATGCCCGTTAAAACTTTTGTTTTTGATCAGATCCAAAAACTGATGGGCTGGTGCCCGGCTTGCAGGAAAATGACATTGCA
AACGGAACAGCCTTGTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRILLVDSFLTLTYLLVMIQLGV
NVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSNKKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLS
FFAGGLAFMWLGYLQILYWERKNHKTIYFDKKYGKWKNSYIIRERK

Sequences:

>Translated_206_residues
MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRILLVDSFLTLTYLLVMIQLGV
NVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSNKKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLS
FFAGGLAFMWLGYLQILYWERKNHKTIYFDKKYGKWKNSYIIRERK
>Mature_206_residues
MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRILLVDSFLTLTYLLVMIQLGV
NVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSNKKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLS
FFAGGLAFMWLGYLQILYWERKNHKTIYFDKKYGKWKNSYIIRERK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24299; Mature: 24299

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRI
CCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCE
LLVDSFLTLTYLLVMIQLGVNVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSN
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLSFFAGGLAFMWLGYLQILYWE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKNHKTIYFDKKYGKWKNSYIIRERK
CCCCCEEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRI
CCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCE
LLVDSFLTLTYLLVMIQLGVNVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSN
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLSFFAGGLAFMWLGYLQILYWE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKNHKTIYFDKKYGKWKNSYIIRERK
CCCCCEEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA