| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227311
Identifier: 21227311
GI number: 21227311
Start: 1432543
End: 1433163
Strand: Direct
Name: 21227311
Synonym: MM_1209
Alternate gene names: NA
Gene position: 1432543-1433163 (Clockwise)
Preceding gene: 21227310
Following gene: 21227312
Centisome position: 34.97
GC content: 38.0
Gene sequence:
>621_bases GTGAACCTGAATATTGAATACATTAAAAAACTTATGGGCTGGTGCCCGAATGCCAGAGCATCTGAAGCCAGACGAAATGT TAGCTGTGAGAATTTTGATTCTGATGTTCCGGAAAGAGCAGGGGGAGAAAACGGAGGTCTGAAAAATACAGGATGGTTCC GGAAGTCGAGTAGCAGAATTCTCTTAGTTGATTCTTTTCTTACACTTACATATCTCCTGGTAATGATCCAATTGGGCGTA AATGTAGTGACTTTACTCGCTGGATTTTTCATTTCCTTAACTTTTTTCATTTTTGGCTGGAAGAAGCAGATGCAAAGGTA CGATACTCTCGCACAAAAACTCGTTCTTGATGATTCCAACAAGAAAAACCTGTATAAAAAACTTTTTCGAATAATAACTC TGATCTTCTATGCCACACTTTTTTACTGGATTTTTGCAGGAGATTTGGAAAGAAATTTTCTCATGAAAGGAACCCTTTCT TTCTTTGCAGGCGGACTCGCCTTCATGTGGCTTGGCTATCTTCAGATACTATACTGGGAAAGGAAGAATCACAAAACGAT CTATTTTGATAAAAAGTATGGAAAGTGGAAAAATTCGTATATCATTCGGGAGAGAAAATAA
Upstream 100 bases:
>100_bases AGCTAATTTACTGGGAGAAGGAAAACCATATGAAAATTTATATAAAAAGTGAGAAGGGATTCCAGAAGATGTATGCACTT GGAGAAAAGGAGAGGGAACT
Downstream 100 bases:
>100_bases ATGCCCGTTAAAACTTTTGTTTTTGATCAGATCCAAAAACTGATGGGCTGGTGCCCGGCTTGCAGGAAAATGACATTGCA AACGGAACAGCCTTGTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRILLVDSFLTLTYLLVMIQLGV NVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSNKKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLS FFAGGLAFMWLGYLQILYWERKNHKTIYFDKKYGKWKNSYIIRERK
Sequences:
>Translated_206_residues MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRILLVDSFLTLTYLLVMIQLGV NVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSNKKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLS FFAGGLAFMWLGYLQILYWERKNHKTIYFDKKYGKWKNSYIIRERK >Mature_206_residues MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRILLVDSFLTLTYLLVMIQLGV NVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSNKKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLS FFAGGLAFMWLGYLQILYWERKNHKTIYFDKKYGKWKNSYIIRERK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24299; Mature: 24299
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRI CCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCE LLVDSFLTLTYLLVMIQLGVNVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSN EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLSFFAGGLAFMWLGYLQILYWE HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKNHKTIYFDKKYGKWKNSYIIRERK CCCCCEEEEECCCCCCCCCEEEEECC >Mature Secondary Structure MNLNIEYIKKLMGWCPNARASEARRNVSCENFDSDVPERAGGENGGLKNTGWFRKSSSRI CCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCE LLVDSFLTLTYLLVMIQLGVNVVTLLAGFFISLTFFIFGWKKQMQRYDTLAQKLVLDDSN EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KKNLYKKLFRIITLIFYATLFYWIFAGDLERNFLMKGTLSFFAGGLAFMWLGYLQILYWE HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKNHKTIYFDKKYGKWKNSYIIRERK CCCCCEEEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA