Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227310

Identifier: 21227310

GI number: 21227310

Start: 1431914

End: 1432546

Strand: Direct

Name: 21227310

Synonym: MM_1208

Alternate gene names: NA

Gene position: 1431914-1432546 (Clockwise)

Preceding gene: 21227309

Following gene: 21227311

Centisome position: 34.96

GC content: 39.97

Gene sequence:

>633_bases
ATGATCCGGGAAGCCAGATACATAAAAAAATTGGTGGGCTGGTGTCCCTATGCAAAAACCACCGGATTGGACTCCCGGAC
TGGTCCCGCTAATTTTGAAGCATATGATCAGTCTGGAGGAGAAAAAGCCGGTGGGCCTGAAGTTCTCAGCCGATTCTCCA
GGCTCTTTTCCAGGTATGATGTCAGAATTCTTCTACCAACACTATTCTTTACTTTTTATCTCATAATTTTGTTATCTCAA
AAGGGTATAAACTCAGAGGCTTTCCTTCTGGGCCTTTCACTTTCTTTACTTACCTATTTGCTCGGCTGGAAAAAGCAGAT
GAATAAGTACGATGCTCTGACAAAAAAACCTGCTGTTGTCTCTTCCTTTAAAAAAACATTCATCTGGGTTCTCTCAGTCA
TAATTTTGGGCTTAATTTTGTTTATGGTTTTACTGTCTCATTTATCTCATATGCTCCATTTTCCTAACGCTCAGTCAATG
TATTCTTTTATTGCAGGGGCTTGGATACTGATGTGGGGAAGTTATCTTCAGCTAATTTACTGGGAGAAGGAAAACCATAT
GAAAATTTATATAAAAAGTGAGAAGGGATTCCAGAAGATGTATGCACTTGGAGAAAAGGAGAGGGAACTGTGA

Upstream 100 bases:

>100_bases
AGCTAATTTACTGGGAGAGGAAGAACCATATGAAAATATATATAAAAAGAGAAAATGCACAGCAAAAGCTGTATGTCCTT
GAGGAAAAGGGGGGAGAACT

Downstream 100 bases:

>100_bases
ACCTGAATATTGAATACATTAAAAAACTTATGGGCTGGTGCCCGAATGCCAGAGCATCTGAAGCCAGACGAAATGTTAGC
TGTGAGAATTTTGATTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIREARYIKKLVGWCPYAKTTGLDSRTGPANFEAYDQSGGEKAGGPEVLSRFSRLFSRYDVRILLPTLFFTFYLIILLSQ
KGINSEAFLLGLSLSLLTYLLGWKKQMNKYDALTKKPAVVSSFKKTFIWVLSVIILGLILFMVLLSHLSHMLHFPNAQSM
YSFIAGAWILMWGSYLQLIYWEKENHMKIYIKSEKGFQKMYALGEKEREL

Sequences:

>Translated_210_residues
MIREARYIKKLVGWCPYAKTTGLDSRTGPANFEAYDQSGGEKAGGPEVLSRFSRLFSRYDVRILLPTLFFTFYLIILLSQ
KGINSEAFLLGLSLSLLTYLLGWKKQMNKYDALTKKPAVVSSFKKTFIWVLSVIILGLILFMVLLSHLSHMLHFPNAQSM
YSFIAGAWILMWGSYLQLIYWEKENHMKIYIKSEKGFQKMYALGEKEREL
>Mature_210_residues
MIREARYIKKLVGWCPYAKTTGLDSRTGPANFEAYDQSGGEKAGGPEVLSRFSRLFSRYDVRILLPTLFFTFYLIILLSQ
KGINSEAFLLGLSLSLLTYLLGWKKQMNKYDALTKKPAVVSSFKKTFIWVLSVIILGLILFMVLLSHLSHMLHFPNAQSM
YSFIAGAWILMWGSYLQLIYWEKENHMKIYIKSEKGFQKMYALGEKEREL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24264; Mature: 24264

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIREARYIKKLVGWCPYAKTTGLDSRTGPANFEAYDQSGGEKAGGPEVLSRFSRLFSRYD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCC
VRILLPTLFFTFYLIILLSQKGINSEAFLLGLSLSLLTYLLGWKKQMNKYDALTKKPAVV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SSFKKTFIWVLSVIILGLILFMVLLSHLSHMLHFPNAQSMYSFIAGAWILMWGSYLQLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHE
WEKENHMKIYIKSEKGFQKMYALGEKEREL
EECCCCEEEEEECCHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MIREARYIKKLVGWCPYAKTTGLDSRTGPANFEAYDQSGGEKAGGPEVLSRFSRLFSRYD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCC
VRILLPTLFFTFYLIILLSQKGINSEAFLLGLSLSLLTYLLGWKKQMNKYDALTKKPAVV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SSFKKTFIWVLSVIILGLILFMVLLSHLSHMLHFPNAQSMYSFIAGAWILMWGSYLQLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHE
WEKENHMKIYIKSEKGFQKMYALGEKEREL
EECCCCEEEEEECCHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA