Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227292

Identifier: 21227292

GI number: 21227292

Start: 1414602

End: 1416503

Strand: Direct

Name: 21227292

Synonym: MM_1190

Alternate gene names: NA

Gene position: 1414602-1416503 (Clockwise)

Preceding gene: 21227291

Following gene: 21227296

Centisome position: 34.53

GC content: 41.27

Gene sequence:

>1902_bases
TTGAGAAAAAGTCAATTAATACTTATACTGGCAATACTCGTCTTAACCTCAACGCCGGTAATGGCATCCTCAGCGCCGAC
AGTGGCATGCTGTGAAGAGACAGAGACAATTGCTAATTTGAATTTTACTGATAAAGTGGTCTATTTTCTGGACCACACCA
GTGACCCGGCAGAAGGGAACTGGATTGTAATGGGGTGCCCGAATGAAGGCACAAGGATTCAACTTCCTACACCGATGAAA
CTCACATATAACGGTCCTAAACACATGGAATATGGAGGAGCAAAAGGGGCTCTGAACAAATGTGAAGAAGAAAGTTATAC
CATAACATACCCTTCAACCAGGTCCTATACCACTCATCCGATTTTTCTCCCGACTGAAAAAGTGGAGATGTCTTTCTACG
GAGAGCCAGCTCTTGAAAACGAAACAGTGGATATTTACCTGATCAAATTAACTTCAGGTTGTGCACACGAGCTTCTTGAT
TCTTTCCTGGCAGGAGATATCAGGAACTTAAATACTCTTTTCGAAGAAAGCGCGGGTGAAGAATACAAAAAATACTCTGT
TAAACTTGACGAATGCGGGGATATATCAGACTATAACCTGGGACTTCTTGATGCAGGACAGTACTGCATAGTTATGGTCC
AGCAGAATCAGGATAGAAGTCTGACAGTCCTTTCTTCAACAGCCTTTGTAGTTACAGAACATAAACTGTGTATTTCGTCC
CCTTCCAGTATAGTAAAAGGAAAAGACCTTGACATAAGCATGTCACTGGAAGGAGCTGCCGGGAATGATTGCACATACGC
GGCTGTGCTCATAAAAGAGCAGGCATATAAAGCAAACATAGAAATAAACTCAAATGGCACGAAAGCCGGAACTTCAGTCA
TAGTTAATGAAGTGGACCTTATTGAAGAATTTGATATCAACTCCTCAAATTACAGGTCAAAATTGACAAAGAATGAGCTC
CAGACAGAAATTCAGACCCTTATAGGAGAAGGAAAAGGTGCGATAGCAATAGGAGAAGTCGGCCAGGATAAACTGTCGCT
TACCGCATTTGATCTGCCTGTAGGATGTTATTACCTCCTTGTGGGCGCATACAGCCCTGAAAAAGGACTTGTAGGCCTTA
ATCAAACGGAAGTAGAAATTAAACCAAAAGGAAGCTCAAAGAGTGATGATAAGAAAGATAAAGAAGACTTTACCGAGCCT
GAGAAAAATATCAAAAAGAAAGATTCCTGCCAGCAGTTTGTGTCAAATGGCAAAAAGGTAAAGTTCTATTTCAAAAATGC
AGCCACTCCTGTAGGTTATATTGAGTTTTACTCCCGGAAGACAGCAGGCAGAATAACGGCTTTTGTTGAGGAATTGAAAG
GAAAGTCCTCAAAAGTTACTGAGGAACCTGAAGGGGAAGTTTACAAATATATCAATATCCAGGTAGGAGACGGGAAGTTA
TCGAGCTCGAAAAATATAAAGGATGCTATAGTGGGTTTCAAGGTGAGCAAAGAATGGATAGATGAAAACCACATTGATAC
GGATACAATAGTCCTTCAGCATTACACCGAAGACCAGTGGAACCCTCTTAAAACGGAAAAAACAGGCGAAGATGACGAAT
ATATTTATTTCGAAGCCGAAACAACGAGTTTCTCTCCCTTTGCAATTGTAGCGAGCAAGAACATCCTCCTGATTGAAGAA
AAAACAGGAGGAGATGAAGACCATTCAATTTCTGACGAAAAACAGCAGGGCAATTCAGAAATAGCCATGGGATCTGATAC
GTCTCCTGTGGAAGACGGGAATTCAGGATTGAAAATTGCCAGCTTCTTGTTGGGGGCCCTTGTGATTATTGCAATAGGAG
CAATTATAAAGAAAAGAACAGCTGAGAAGAGTGAAGACGAAAATTCTGAAAAGAAAACGTGA

Upstream 100 bases:

>100_bases
AAATAAAACAAGATGAATTATTTCAGCCGGATTGAATGAAAAGATTTGCTATCCTGAGCTGATTAACCAGAAATTCAATG
GGGAAAATGGAGGCATGTAA

Downstream 100 bases:

>100_bases
GCAGGAGATAATATCTCCTGTTTAATTCTATTTTTTAAATTAGCCAGCTAACAGCATTTCTATTAAAAACCTGCCTTTTA
CATTTAAATAAGGCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGNWIVMGCPNEGTRIQLPTPMK
LTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHPIFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLD
SFLAGDIRNLNTLFEESAGEEYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS
PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDLIEEFDINSSNYRSKLTKNEL
QTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLLVGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEP
EKNIKKKDSCQQFVSNGKKVKFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL
SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAETTSFSPFAIVASKNILLIEE
KTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIASFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT

Sequences:

>Translated_633_residues
MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGNWIVMGCPNEGTRIQLPTPMK
LTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHPIFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLD
SFLAGDIRNLNTLFEESAGEEYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS
PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDLIEEFDINSSNYRSKLTKNEL
QTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLLVGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEP
EKNIKKKDSCQQFVSNGKKVKFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL
SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAETTSFSPFAIVASKNILLIEE
KTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIASFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT
>Mature_633_residues
MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGNWIVMGCPNEGTRIQLPTPMK
LTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHPIFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLD
SFLAGDIRNLNTLFEESAGEEYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS
PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDLIEEFDINSSNYRSKLTKNEL
QTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLLVGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEP
EKNIKKKDSCQQFVSNGKKVKFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL
SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAETTSFSPFAIVASKNILLIEE
KTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIASFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69654; Mature: 69654

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGN
CCCCHHHHHHHHHHHCCCCCEECCCCCEEECCCCHHEECCCCCCEEEEEEECCCCCCCCC
WIVMGCPNEGTRIQLPTPMKLTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHP
EEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE
IFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLDSFLAGDIRNLNTLFEESAGE
EEECCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCC
EYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS
CHHHEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEECEEEEEEECEEEECC
PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDL
CCHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEHHHH
IEEFDINSSNYRSKLTKNELQTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCEEEEE
VGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEPEKNIKKKDSCQQFVSNGKKV
EECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHCCCEE
KFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL
EEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCC
SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAE
CCCCCCHHHHEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
TTSFSPFAIVASKNILLIEEKTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIA
CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCHHHH
SFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGN
CCCCHHHHHHHHHHHCCCCCEECCCCCEEECCCCHHEECCCCCCEEEEEEECCCCCCCCC
WIVMGCPNEGTRIQLPTPMKLTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHP
EEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE
IFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLDSFLAGDIRNLNTLFEESAGE
EEECCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCC
EYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS
CHHHEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEECEEEEEEECEEEECC
PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDL
CCHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEHHHH
IEEFDINSSNYRSKLTKNELQTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCEEEEE
VGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEPEKNIKKKDSCQQFVSNGKKV
EECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHCCCEE
KFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL
EEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCC
SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAE
CCCCCCHHHHEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
TTSFSPFAIVASKNILLIEEKTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIA
CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCHHHH
SFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA