| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227292
Identifier: 21227292
GI number: 21227292
Start: 1414602
End: 1416503
Strand: Direct
Name: 21227292
Synonym: MM_1190
Alternate gene names: NA
Gene position: 1414602-1416503 (Clockwise)
Preceding gene: 21227291
Following gene: 21227296
Centisome position: 34.53
GC content: 41.27
Gene sequence:
>1902_bases TTGAGAAAAAGTCAATTAATACTTATACTGGCAATACTCGTCTTAACCTCAACGCCGGTAATGGCATCCTCAGCGCCGAC AGTGGCATGCTGTGAAGAGACAGAGACAATTGCTAATTTGAATTTTACTGATAAAGTGGTCTATTTTCTGGACCACACCA GTGACCCGGCAGAAGGGAACTGGATTGTAATGGGGTGCCCGAATGAAGGCACAAGGATTCAACTTCCTACACCGATGAAA CTCACATATAACGGTCCTAAACACATGGAATATGGAGGAGCAAAAGGGGCTCTGAACAAATGTGAAGAAGAAAGTTATAC CATAACATACCCTTCAACCAGGTCCTATACCACTCATCCGATTTTTCTCCCGACTGAAAAAGTGGAGATGTCTTTCTACG GAGAGCCAGCTCTTGAAAACGAAACAGTGGATATTTACCTGATCAAATTAACTTCAGGTTGTGCACACGAGCTTCTTGAT TCTTTCCTGGCAGGAGATATCAGGAACTTAAATACTCTTTTCGAAGAAAGCGCGGGTGAAGAATACAAAAAATACTCTGT TAAACTTGACGAATGCGGGGATATATCAGACTATAACCTGGGACTTCTTGATGCAGGACAGTACTGCATAGTTATGGTCC AGCAGAATCAGGATAGAAGTCTGACAGTCCTTTCTTCAACAGCCTTTGTAGTTACAGAACATAAACTGTGTATTTCGTCC CCTTCCAGTATAGTAAAAGGAAAAGACCTTGACATAAGCATGTCACTGGAAGGAGCTGCCGGGAATGATTGCACATACGC GGCTGTGCTCATAAAAGAGCAGGCATATAAAGCAAACATAGAAATAAACTCAAATGGCACGAAAGCCGGAACTTCAGTCA TAGTTAATGAAGTGGACCTTATTGAAGAATTTGATATCAACTCCTCAAATTACAGGTCAAAATTGACAAAGAATGAGCTC CAGACAGAAATTCAGACCCTTATAGGAGAAGGAAAAGGTGCGATAGCAATAGGAGAAGTCGGCCAGGATAAACTGTCGCT TACCGCATTTGATCTGCCTGTAGGATGTTATTACCTCCTTGTGGGCGCATACAGCCCTGAAAAAGGACTTGTAGGCCTTA ATCAAACGGAAGTAGAAATTAAACCAAAAGGAAGCTCAAAGAGTGATGATAAGAAAGATAAAGAAGACTTTACCGAGCCT GAGAAAAATATCAAAAAGAAAGATTCCTGCCAGCAGTTTGTGTCAAATGGCAAAAAGGTAAAGTTCTATTTCAAAAATGC AGCCACTCCTGTAGGTTATATTGAGTTTTACTCCCGGAAGACAGCAGGCAGAATAACGGCTTTTGTTGAGGAATTGAAAG GAAAGTCCTCAAAAGTTACTGAGGAACCTGAAGGGGAAGTTTACAAATATATCAATATCCAGGTAGGAGACGGGAAGTTA TCGAGCTCGAAAAATATAAAGGATGCTATAGTGGGTTTCAAGGTGAGCAAAGAATGGATAGATGAAAACCACATTGATAC GGATACAATAGTCCTTCAGCATTACACCGAAGACCAGTGGAACCCTCTTAAAACGGAAAAAACAGGCGAAGATGACGAAT ATATTTATTTCGAAGCCGAAACAACGAGTTTCTCTCCCTTTGCAATTGTAGCGAGCAAGAACATCCTCCTGATTGAAGAA AAAACAGGAGGAGATGAAGACCATTCAATTTCTGACGAAAAACAGCAGGGCAATTCAGAAATAGCCATGGGATCTGATAC GTCTCCTGTGGAAGACGGGAATTCAGGATTGAAAATTGCCAGCTTCTTGTTGGGGGCCCTTGTGATTATTGCAATAGGAG CAATTATAAAGAAAAGAACAGCTGAGAAGAGTGAAGACGAAAATTCTGAAAAGAAAACGTGA
Upstream 100 bases:
>100_bases AAATAAAACAAGATGAATTATTTCAGCCGGATTGAATGAAAAGATTTGCTATCCTGAGCTGATTAACCAGAAATTCAATG GGGAAAATGGAGGCATGTAA
Downstream 100 bases:
>100_bases GCAGGAGATAATATCTCCTGTTTAATTCTATTTTTTAAATTAGCCAGCTAACAGCATTTCTATTAAAAACCTGCCTTTTA CATTTAAATAAGGCTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGNWIVMGCPNEGTRIQLPTPMK LTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHPIFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLD SFLAGDIRNLNTLFEESAGEEYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDLIEEFDINSSNYRSKLTKNEL QTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLLVGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEP EKNIKKKDSCQQFVSNGKKVKFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAETTSFSPFAIVASKNILLIEE KTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIASFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT
Sequences:
>Translated_633_residues MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGNWIVMGCPNEGTRIQLPTPMK LTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHPIFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLD SFLAGDIRNLNTLFEESAGEEYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDLIEEFDINSSNYRSKLTKNEL QTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLLVGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEP EKNIKKKDSCQQFVSNGKKVKFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAETTSFSPFAIVASKNILLIEE KTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIASFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT >Mature_633_residues MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGNWIVMGCPNEGTRIQLPTPMK LTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHPIFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLD SFLAGDIRNLNTLFEESAGEEYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDLIEEFDINSSNYRSKLTKNEL QTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLLVGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEP EKNIKKKDSCQQFVSNGKKVKFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAETTSFSPFAIVASKNILLIEE KTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIASFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69654; Mature: 69654
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGN CCCCHHHHHHHHHHHCCCCCEECCCCCEEECCCCHHEECCCCCCEEEEEEECCCCCCCCC WIVMGCPNEGTRIQLPTPMKLTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHP EEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE IFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLDSFLAGDIRNLNTLFEESAGE EEECCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCC EYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS CHHHEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEECEEEEEEECEEEECC PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDL CCHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEHHHH IEEFDINSSNYRSKLTKNELQTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLL HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCEEEEE VGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEPEKNIKKKDSCQQFVSNGKKV EECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHCCCEE KFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL EEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCC SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAE CCCCCCHHHHEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC TTSFSPFAIVASKNILLIEEKTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIA CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCHHHH SFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRKSQLILILAILVLTSTPVMASSAPTVACCEETETIANLNFTDKVVYFLDHTSDPAEGN CCCCHHHHHHHHHHHCCCCCEECCCCCEEECCCCHHEECCCCCCEEEEEEECCCCCCCCC WIVMGCPNEGTRIQLPTPMKLTYNGPKHMEYGGAKGALNKCEEESYTITYPSTRSYTTHP EEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE IFLPTEKVEMSFYGEPALENETVDIYLIKLTSGCAHELLDSFLAGDIRNLNTLFEESAGE EEECCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCC EYKKYSVKLDECGDISDYNLGLLDAGQYCIVMVQQNQDRSLTVLSSTAFVVTEHKLCISS CHHHEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEECEEEEEEECEEEECC PSSIVKGKDLDISMSLEGAAGNDCTYAAVLIKEQAYKANIEINSNGTKAGTSVIVNEVDL CCHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEHHHH IEEFDINSSNYRSKLTKNELQTEIQTLIGEGKGAIAIGEVGQDKLSLTAFDLPVGCYYLL HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCEEEEE VGAYSPEKGLVGLNQTEVEIKPKGSSKSDDKKDKEDFTEPEKNIKKKDSCQQFVSNGKKV EECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHCCCEE KFYFKNAATPVGYIEFYSRKTAGRITAFVEELKGKSSKVTEEPEGEVYKYINIQVGDGKL EEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCC SSSKNIKDAIVGFKVSKEWIDENHIDTDTIVLQHYTEDQWNPLKTEKTGEDDEYIYFEAE CCCCCCHHHHEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC TTSFSPFAIVASKNILLIEEKTGGDEDHSISDEKQQGNSEIAMGSDTSPVEDGNSGLKIA CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCHHHH SFLLGALVIIAIGAIIKKRTAEKSEDENSEKKT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA