| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227283
Identifier: 21227283
GI number: 21227283
Start: 1402297
End: 1403268
Strand: Reverse
Name: 21227283
Synonym: MM_1181
Alternate gene names: NA
Gene position: 1403268-1402297 (Counterclockwise)
Preceding gene: 21227284
Following gene: 21227282
Centisome position: 34.26
GC content: 40.43
Gene sequence:
>972_bases GTGCATGTAAAATACAATCATCCTTCAGCCCTTATAACCTCTATTGTGGGAGAAGCATTCGTTGATGGTTATTTACTTCT TAAGGATGAAAGCTTTGAAAAAGCTGCTCTGCGGGCAAGAGATTTCGTGCTTGCAAGCCAGTTCTCTCCTGGCTATTTCA AAAAGTCTTCCATTTACGTAGCTGATCATCTAAATGTGGATGCCACCTGTGGCGCTTTTCTCGCAAAATACGGAAAAGTA TTTTCCGATCAGCAGTGCCTCGATTCCGCCAGGATAACAGCAGAACATATTTGCAAATACCAGTTTTCAGACGGGGCTTT TCCTTATACTAACGAAAACAAAGGTAATTATCAGTACTGTTTGGATATCCCCTGCATCCATTACCAAGGTGTAACTCTTT ACTACCTGTTAAAGATCATAGATTCACTGGAAAATGACTGGCTTGATGCCGAATTTGAAAAAGGAGTCAAATGGCTTGCA GCTGTCCAGTTCCCTGATGGCAAATTTGATTGGTCAAAAAGCGGCCTTATGTTTGCTTACTATCTGAGTGGGGCTTATGC TTTTGCAACCCCCTGCTTTATTTACGGGACAAAATGGAGTTCCGGTTACTCAGAAAATGCAGAAAAAGCTCTGAAAGTAC TCGAATCAAATGTCAAAGACATTGTAAATCGCTGGGAAAGTGGCCCGATGTTGAGCTTTCCTGCTTCGGTTTTCACAGCT CTTAATACTGCAAACATAGGGAATTATCCTGTTAGCCATAGACTCTTCAGGTTTGGATACGGCATGTACAGGCAATTTTC CAGGCGCAGGTTTTCAAACTCTGTAAATCCGAAACTTTTTAATATTCTTTCGTACATTATGTGTATAAACACATCGACAA TTGAACCGGATAATAATTTTCCCGACTTATTCATGACTTCGGAAGTGCTGGACTGTTTGAGTTATTCAATACACAGAGAA ATTAAAAAATGA
Upstream 100 bases:
>100_bases AAGGATTAACGGAATTAATGGAGATAACTATACAGAAATTATTGAGAAACTCCTGAACTGGAATCTTGAAAAACAGAATC CAGATGGTTCCTGGAATGAA
Downstream 100 bases:
>100_bases AATTAACTTTATAAATATCATGATAAGGAGCTTCAGTATGAAACAGGTTGTCCTGAATCTTAAAGATGGAGATTTGACGG TTGAAGACGTCCCAATTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHVKYNHPSALITSIVGEAFVDGYLLLKDESFEKAALRARDFVLASQFSPGYFKKSSIYVADHLNVDATCGAFLAKYGKV FSDQQCLDSARITAEHICKYQFSDGAFPYTNENKGNYQYCLDIPCIHYQGVTLYYLLKIIDSLENDWLDAEFEKGVKWLA AVQFPDGKFDWSKSGLMFAYYLSGAYAFATPCFIYGTKWSSGYSENAEKALKVLESNVKDIVNRWESGPMLSFPASVFTA LNTANIGNYPVSHRLFRFGYGMYRQFSRRRFSNSVNPKLFNILSYIMCINTSTIEPDNNFPDLFMTSEVLDCLSYSIHRE IKK
Sequences:
>Translated_323_residues MHVKYNHPSALITSIVGEAFVDGYLLLKDESFEKAALRARDFVLASQFSPGYFKKSSIYVADHLNVDATCGAFLAKYGKV FSDQQCLDSARITAEHICKYQFSDGAFPYTNENKGNYQYCLDIPCIHYQGVTLYYLLKIIDSLENDWLDAEFEKGVKWLA AVQFPDGKFDWSKSGLMFAYYLSGAYAFATPCFIYGTKWSSGYSENAEKALKVLESNVKDIVNRWESGPMLSFPASVFTA LNTANIGNYPVSHRLFRFGYGMYRQFSRRRFSNSVNPKLFNILSYIMCINTSTIEPDNNFPDLFMTSEVLDCLSYSIHRE IKK >Mature_323_residues MHVKYNHPSALITSIVGEAFVDGYLLLKDESFEKAALRARDFVLASQFSPGYFKKSSIYVADHLNVDATCGAFLAKYGKV FSDQQCLDSARITAEHICKYQFSDGAFPYTNENKGNYQYCLDIPCIHYQGVTLYYLLKIIDSLENDWLDAEFEKGVKWLA AVQFPDGKFDWSKSGLMFAYYLSGAYAFATPCFIYGTKWSSGYSENAEKALKVLESNVKDIVNRWESGPMLSFPASVFTA LNTANIGNYPVSHRLFRFGYGMYRQFSRRRFSNSVNPKLFNILSYIMCINTSTIEPDNNFPDLFMTSEVLDCLSYSIHRE IKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36826; Mature: 36826
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVKYNHPSALITSIVGEAFVDGYLLLKDESFEKAALRARDFVLASQFSPGYFKKSSIYV CCEECCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHEECCCCCCCEECCCEEE ADHLNVDATCGAFLAKYGKVFSDQQCLDSARITAEHICKYQFSDGAFPYTNENKGNYQYC EECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEE LDIPCIHYQGVTLYYLLKIIDSLENDWLDAEFEKGVKWLAAVQFPDGKFDWSKSGLMFAY EECCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEECCCCCCCCCCCCEEEEH YLSGAYAFATPCFIYGTKWSSGYSENAEKALKVLESNVKDIVNRWESGPMLSFPASVFTA HHCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHH LNTANIGNYPVSHRLFRFGYGMYRQFSRRRFSNSVNPKLFNILSYIMCINTSTIEPDNNF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC PDLFMTSEVLDCLSYSIHREIKK CCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHVKYNHPSALITSIVGEAFVDGYLLLKDESFEKAALRARDFVLASQFSPGYFKKSSIYV CCEECCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHEECCCCCCCEECCCEEE ADHLNVDATCGAFLAKYGKVFSDQQCLDSARITAEHICKYQFSDGAFPYTNENKGNYQYC EECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEE LDIPCIHYQGVTLYYLLKIIDSLENDWLDAEFEKGVKWLAAVQFPDGKFDWSKSGLMFAY EECCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEECCCCCCCCCCCCEEEEH YLSGAYAFATPCFIYGTKWSSGYSENAEKALKVLESNVKDIVNRWESGPMLSFPASVFTA HHCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHH LNTANIGNYPVSHRLFRFGYGMYRQFSRRRFSNSVNPKLFNILSYIMCINTSTIEPDNNF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC PDLFMTSEVLDCLSYSIHREIKK CCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA