Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 21227267

GI number: 21227267

Start: 1383859

End: 1384695

Strand: Reverse

Name: ybfF [C]

Synonym: MM_1165

Alternate gene names: 21227267

Gene position: 1384695-1383859 (Counterclockwise)

Preceding gene: 21227275

Following gene: 21227264

Centisome position: 33.8

GC content: 52.57

Gene sequence:

>837_bases
GTGTCCATAGGCAGCATTGTCCTGCTTGCCAGGAAGTACGCTGACAGGGTGATAGTTGTAGATGAGGGGAGCACGGACAG
GACAGCCGAGCTTGCTGCAATCGCAGGTGCTGAAGTAATCGTGCATTCTTCGAATATCGGCAAGGGTATGGCTTTTAAGA
CCGGGTTTGCAGCAGCTGAGGGCGCAGATATAATAGTCACCATGGACTCTGACGGGCAGCACAACCCTGCGGATATTCCG
AAGCTCGTTGCCCCGGTCCTCAGCGGCGAAGCTGACATGGTAAATGGGAGCCGTTACCTGAACGGCAGGGAGACGGACAC
TCCCGCATACAGGCGCGTAGGTCAGGCTATCCTTGACAGGGCCACGGTAATGAACTCAGACGTCAAAATCACCGACTCGC
AGAGCGGTTTCCGCGCATTTTCAGCCTCCACAAAAGATATCTTCCGCTTCAATGCGCATGGAATGGCAATAGAAAGTGAA
ATGCTTGCCGACGCAGGCAGGGCAGGGTTAAGGGTAAAAGAGGTGCCCATAGGCGTCAGGTATGACGTTGACGGCTCGAC
CGAAAATCCGGTAAGGCATAGGGTCACCGTTCTCTTAATGATTTTTAAGGACATGGAGTACAGCAAACCTCTGTACTACT
TTACACTTCCCGGTTTCCTTCTCGGGGCGGGCGGGTTTTACATGGGACTCACTTTCTTAAGGAATTTCTACCTGGGTGGG
AGTCTGGAATTCGGGCCTACCGTGCTCATGATCCTTCTGACTATCGTCGGTGTATTCATGTCTTTTACCGGGGTTCTCCT
GCATTCGATAGCCGGGCTGCTCATGCATCTAAAATAA

Upstream 100 bases:

>100_bases
CTGAGGGTAGTTCTTTCTCTTTTATTCCGCAGGAAATCTCTGAAAGGAGCAGATAGATTGCCGGAAAATAGCCGTTATTC
TTCCGGCTTATAATGAGGAG

Downstream 100 bases:

>100_bases
GTAGGTTCTGGCGGGATGAATTATGCTGTAATGGTATCTGAAAAATATCTAACATAACATACATTCCATAACATTCATGG
CATGTATCTAAATTACTTGA

Product: dolichyl-phosphate mannose synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSIGSIVLLARKYADRVIVVDEGSTDRTAELAAIAGAEVIVHSSNIGKGMAFKTGFAAAEGADIIVTMDSDGQHNPADIP
KLVAPVLSGEADMVNGSRYLNGRETDTPAYRRVGQAILDRATVMNSDVKITDSQSGFRAFSASTKDIFRFNAHGMAIESE
MLADAGRAGLRVKEVPIGVRYDVDGSTENPVRHRVTVLLMIFKDMEYSKPLYYFTLPGFLLGAGGFYMGLTFLRNFYLGG
SLEFGPTVLMILLTIVGVFMSFTGVLLHSIAGLLMHLK

Sequences:

>Translated_278_residues
MSIGSIVLLARKYADRVIVVDEGSTDRTAELAAIAGAEVIVHSSNIGKGMAFKTGFAAAEGADIIVTMDSDGQHNPADIP
KLVAPVLSGEADMVNGSRYLNGRETDTPAYRRVGQAILDRATVMNSDVKITDSQSGFRAFSASTKDIFRFNAHGMAIESE
MLADAGRAGLRVKEVPIGVRYDVDGSTENPVRHRVTVLLMIFKDMEYSKPLYYFTLPGFLLGAGGFYMGLTFLRNFYLGG
SLEFGPTVLMILLTIVGVFMSFTGVLLHSIAGLLMHLK
>Mature_277_residues
SIGSIVLLARKYADRVIVVDEGSTDRTAELAAIAGAEVIVHSSNIGKGMAFKTGFAAAEGADIIVTMDSDGQHNPADIPK
LVAPVLSGEADMVNGSRYLNGRETDTPAYRRVGQAILDRATVMNSDVKITDSQSGFRAFSASTKDIFRFNAHGMAIESEM
LADAGRAGLRVKEVPIGVRYDVDGSTENPVRHRVTVLLMIFKDMEYSKPLYYFTLPGFLLGAGGFYMGLTFLRNFYLGGS
LEFGPTVLMILLTIVGVFMSFTGVLLHSIAGLLMHLK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 29998; Mature: 29867

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGSIVLLARKYADRVIVVDEGSTDRTAELAAIAGAEVIVHSSNIGKGMAFKTGFAAAE
CCCCHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCC
GADIIVTMDSDGQHNPADIPKLVAPVLSGEADMVNGSRYLNGRETDTPAYRRVGQAILDR
CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEECCCEEECCCCCCCHHHHHHHHHHHHH
ATVMNSDVKITDSQSGFRAFSASTKDIFRFNAHGMAIESEMLADAGRAGLRVKEVPIGVR
HHHCCCCEEEECCCCCCEECCCCCCHHEEECCCCCEEHHHHHHHCCCCCCEEEECCEEEE
YDVDGSTENPVRHRVTVLLMIFKDMEYSKPLYYFTLPGFLLGAGGFYMGLTFLRNFYLGG
EECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCC
SLEFGPTVLMILLTIVGVFMSFTGVLLHSIAGLLMHLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIGSIVLLARKYADRVIVVDEGSTDRTAELAAIAGAEVIVHSSNIGKGMAFKTGFAAAE
CCCHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCC
GADIIVTMDSDGQHNPADIPKLVAPVLSGEADMVNGSRYLNGRETDTPAYRRVGQAILDR
CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEECCCEEECCCCCCCHHHHHHHHHHHHH
ATVMNSDVKITDSQSGFRAFSASTKDIFRFNAHGMAIESEMLADAGRAGLRVKEVPIGVR
HHHCCCCEEEECCCCCCEECCCCCCHHEEECCCCCEEHHHHHHHCCCCCCEEEECCEEEE
YDVDGSTENPVRHRVTVLLMIFKDMEYSKPLYYFTLPGFLLGAGGFYMGLTFLRNFYLGG
EECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCC
SLEFGPTVLMILLTIVGVFMSFTGVLLHSIAGLLMHLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]