Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227247

Identifier: 21227247

GI number: 21227247

Start: 1358730

End: 1360337

Strand: Reverse

Name: 21227247

Synonym: MM_1145

Alternate gene names: NA

Gene position: 1360337-1358730 (Counterclockwise)

Preceding gene: 21227248

Following gene: 21227242

Centisome position: 33.21

GC content: 38.87

Gene sequence:

>1608_bases
ATGAAAAAAAGAAATTGGATATGTAAATGGAAAAATAGAAAAAATGTCGGAATTTACATTGTAATTCTCTTTTTTTTAAT
CTTAACTGGAACAGCCTCGATTTCTCTTACTCCAGATATGACAGTTTATGTTGCAGGAGATAGCAGTGGAGACTTCAACT
GTGATGGAGAGGCTGACCAGGTAGAGATAAATCAGGCCCTTAAATTTGTAGCAGAAAACCCTGACTATACCACTGTTTAT
CTCAAAGGCCCCTTCACCTATACTATTGACGAAACTATTTACATCCACAGCAACACAACCCTTAAAGGAGATTCAGATGC
TGTTGTCAAACTGATTGATCGTGCTGGATGGACCAATAAGCCCATGATACCTTTGATTGGTAAATATGGAGATTCAAAAA
TAACCAATGTAACTATCAGTGGGTTTGAAATTGATGGAAATCATGATGGGAACACTGGACATTCCAAAGGTCAGGGCTAC
TATAATATGATTTATTTTAACAACGCGACAAATATAACAGTTTGCAATATGTATATGCACGACGGCCATGGTGATGGGCT
GCGGATTAACTATGGTGAAAATATCCAGTTTTATAATAATAATATATATCAACTTGGACATGACGGGCTTTATGCTATTG
AATCTTACAATGTAAAAGCCTGGAATAATACAATAACCTGCAGGACCAACAGTGGTCTCAGAGTCTGGAATTCAAATCAC
GTAAAATTTTATGATAATGTTATTGACTCGACTTATGATAGGAGCGCAGGAGGACCCGGAATCCAGATTCAAAAATCCTC
AGCTGTTATGGATGATATAGAAGTTTATAACAATGTTATCCATAACACCTTTGGGCCCGGGTTATGGCTGATAGGTTACG
ACTCTTCTTACTCTAAAGAGGAGGCTCGAAACGTCCACATCCATCACAATATATTTTACAGTACTGGAACAAATCCAAGC
ATAGACTGGGTGGGCGGCATCGTAATCAGTGGATTTTATGATACTCTTATCGAAAACAATGTATTTGATGGCGTATACCA
TGCTGCAGTAGTCCATATGTACCCGGATGGCAAGTCTGCCGACCTTTCTCCTAAAGGTAAAGGATATACAACCATTGTCC
GCAATAATATTATAGCGAACACACTTGAACGTAAAAAAAGCTCTCTGGGGACAGGATATGGTGTAATTAACTATCTCCCT
GAATCACATAGTTTCGTGATCCAGAACAATTGTCTTTACAATAATAAAGGTGGAGACTTTATAAATGCAACGTCAACAGG
CAGTGTTTATGAGAATCCGCTTTTTGCAAGCAGGAGGAATCATGATTACCACCTTAAGTCGACAGGCGGCAGATGGAACG
GAAAAACATGGGTAAAAGACCGTGTAATATCTCCATGTATTGATGCAGGTTACTCCTCTTCAGATTATTCACAGGAGCCT
GAAGACAATGGAGACCGGATTAATATAGGAAGGTACGGAAACACTGAGGAAGCATCAAAATCAGGAATAATGCCCGGATA
TCAGGCGTGGTGGTATAAGGTATCTCAGGTATCTCCATTAGGTCTGAAAATACTCAGGACATTGATCAGGATATTCTTTT
TTATTTGA

Upstream 100 bases:

>100_bases
ATAAAAAAGGCTACTGGATTATTTCCTTCCCAATTAAGGATTAAGGTCATTCTCAAAAACAATTTTGGGAATTATTTTAT
TCAAAACACGGGGACTAAGA

Downstream 100 bases:

>100_bases
TATAAGTAAAGGAGGTCTTTCCGAAAACCAGGTGCCTGGAGATCAAATCCCCTTCAGTCCAGATCTCGGGGACCTCCTTA
AAGGACATCCAGAACTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKKRNWICKWKNRKNVGIYIVILFFLILTGTASISLTPDMTVYVAGDSSGDFNCDGEADQVEINQALKFVAENPDYTTVY
LKGPFTYTIDETIYIHSNTTLKGDSDAVVKLIDRAGWTNKPMIPLIGKYGDSKITNVTISGFEIDGNHDGNTGHSKGQGY
YNMIYFNNATNITVCNMYMHDGHGDGLRINYGENIQFYNNNIYQLGHDGLYAIESYNVKAWNNTITCRTNSGLRVWNSNH
VKFYDNVIDSTYDRSAGGPGIQIQKSSAVMDDIEVYNNVIHNTFGPGLWLIGYDSSYSKEEARNVHIHHNIFYSTGTNPS
IDWVGGIVISGFYDTLIENNVFDGVYHAAVVHMYPDGKSADLSPKGKGYTTIVRNNIIANTLERKKSSLGTGYGVINYLP
ESHSFVIQNNCLYNNKGGDFINATSTGSVYENPLFASRRNHDYHLKSTGGRWNGKTWVKDRVISPCIDAGYSSSDYSQEP
EDNGDRINIGRYGNTEEASKSGIMPGYQAWWYKVSQVSPLGLKILRTLIRIFFFI

Sequences:

>Translated_535_residues
MKKRNWICKWKNRKNVGIYIVILFFLILTGTASISLTPDMTVYVAGDSSGDFNCDGEADQVEINQALKFVAENPDYTTVY
LKGPFTYTIDETIYIHSNTTLKGDSDAVVKLIDRAGWTNKPMIPLIGKYGDSKITNVTISGFEIDGNHDGNTGHSKGQGY
YNMIYFNNATNITVCNMYMHDGHGDGLRINYGENIQFYNNNIYQLGHDGLYAIESYNVKAWNNTITCRTNSGLRVWNSNH
VKFYDNVIDSTYDRSAGGPGIQIQKSSAVMDDIEVYNNVIHNTFGPGLWLIGYDSSYSKEEARNVHIHHNIFYSTGTNPS
IDWVGGIVISGFYDTLIENNVFDGVYHAAVVHMYPDGKSADLSPKGKGYTTIVRNNIIANTLERKKSSLGTGYGVINYLP
ESHSFVIQNNCLYNNKGGDFINATSTGSVYENPLFASRRNHDYHLKSTGGRWNGKTWVKDRVISPCIDAGYSSSDYSQEP
EDNGDRINIGRYGNTEEASKSGIMPGYQAWWYKVSQVSPLGLKILRTLIRIFFFI
>Mature_535_residues
MKKRNWICKWKNRKNVGIYIVILFFLILTGTASISLTPDMTVYVAGDSSGDFNCDGEADQVEINQALKFVAENPDYTTVY
LKGPFTYTIDETIYIHSNTTLKGDSDAVVKLIDRAGWTNKPMIPLIGKYGDSKITNVTISGFEIDGNHDGNTGHSKGQGY
YNMIYFNNATNITVCNMYMHDGHGDGLRINYGENIQFYNNNIYQLGHDGLYAIESYNVKAWNNTITCRTNSGLRVWNSNH
VKFYDNVIDSTYDRSAGGPGIQIQKSSAVMDDIEVYNNVIHNTFGPGLWLIGYDSSYSKEEARNVHIHHNIFYSTGTNPS
IDWVGGIVISGFYDTLIENNVFDGVYHAAVVHMYPDGKSADLSPKGKGYTTIVRNNIIANTLERKKSSLGTGYGVINYLP
ESHSFVIQNNCLYNNKGGDFINATSTGSVYENPLFASRRNHDYHLKSTGGRWNGKTWVKDRVISPCIDAGYSSSDYSQEP
EDNGDRINIGRYGNTEEASKSGIMPGYQAWWYKVSQVSPLGLKILRTLIRIFFFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59961; Mature: 59961

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRNWICKWKNRKNVGIYIVILFFLILTGTASISLTPDMTVYVAGDSSGDFNCDGEADQ
CCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCCCCCCE
VEINQALKFVAENPDYTTVYLKGPFTYTIDETIYIHSNTTLKGDSDAVVKLIDRAGWTNK
EEHHHHHHHHCCCCCEEEEEEECCEEEEECCEEEEECCCEECCCCHHHHHHHHHCCCCCC
PMIPLIGKYGDSKITNVTISGFEIDGNHDGNTGHSKGQGYYNMIYFNNATNITVCNMYMH
CCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEE
DGHGDGLRINYGENIQFYNNNIYQLGHDGLYAIESYNVKAWNNTITCRTNSGLRVWNSNH
CCCCCCEEEEECCCEEEECCCEEEECCCCEEEEEEEEEEEECCEEEEEECCCEEEECCCC
VKFYDNVIDSTYDRSAGGPGIQIQKSSAVMDDIEVYNNVIHNTFGPGLWLIGYDSSYSKE
EEEEHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
EARNVHIHHNIFYSTGTNPSIDWVGGIVISGFYDTLIENNVFDGVYHAAVVHMYPDGKSA
HHCEEEEEEEEEEECCCCCCCHHCCCEEEHHHHHHHHCCCCCCCEEEEEEEEECCCCCCC
DLSPKGKGYTTIVRNNIIANTLERKKSSLGTGYGVINYLPESHSFVIQNNCLYNNKGGDF
CCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCEEEECCCCCE
INATSTGSVYENPLFASRRNHDYHLKSTGGRWNGKTWVKDRVISPCIDAGYSSSDYSQEP
EEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCC
EDNGDRINIGRYGNTEEASKSGIMPGYQAWWYKVSQVSPLGLKILRTLIRIFFFI
CCCCCEEEECCCCCCCHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKRNWICKWKNRKNVGIYIVILFFLILTGTASISLTPDMTVYVAGDSSGDFNCDGEADQ
CCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCCCCCCE
VEINQALKFVAENPDYTTVYLKGPFTYTIDETIYIHSNTTLKGDSDAVVKLIDRAGWTNK
EEHHHHHHHHCCCCCEEEEEEECCEEEEECCEEEEECCCEECCCCHHHHHHHHHCCCCCC
PMIPLIGKYGDSKITNVTISGFEIDGNHDGNTGHSKGQGYYNMIYFNNATNITVCNMYMH
CCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEE
DGHGDGLRINYGENIQFYNNNIYQLGHDGLYAIESYNVKAWNNTITCRTNSGLRVWNSNH
CCCCCCEEEEECCCEEEECCCEEEECCCCEEEEEEEEEEEECCEEEEEECCCEEEECCCC
VKFYDNVIDSTYDRSAGGPGIQIQKSSAVMDDIEVYNNVIHNTFGPGLWLIGYDSSYSKE
EEEEHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
EARNVHIHHNIFYSTGTNPSIDWVGGIVISGFYDTLIENNVFDGVYHAAVVHMYPDGKSA
HHCEEEEEEEEEEECCCCCCCHHCCCEEEHHHHHHHHCCCCCCCEEEEEEEEECCCCCCC
DLSPKGKGYTTIVRNNIIANTLERKKSSLGTGYGVINYLPESHSFVIQNNCLYNNKGGDF
CCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCEEEECCCCCE
INATSTGSVYENPLFASRRNHDYHLKSTGGRWNGKTWVKDRVISPCIDAGYSSSDYSQEP
EEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCC
EDNGDRINIGRYGNTEEASKSGIMPGYQAWWYKVSQVSPLGLKILRTLIRIFFFI
CCCCCEEEECCCCCCCHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA